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The map label for this gene is yrdN

Identifier: 16079719

GI number: 16079719

Start: 2725114

End: 2725503

Strand: Reverse

Name: yrdN

Synonym: BSU26660

Alternate gene names: 16079719

Gene position: 2725503-2725114 (Counterclockwise)

Preceding gene: 255767616

Following gene: 16079718

Centisome position: 64.65

GC content: 35.9

Gene sequence:

>390_bases
ATGCCATTACTTCGTTTTGACTTAATAGAAGGGCGAGATCAATCAAGTTTGAAAAAACTTTTAGATGTCGCTCACAATGT
TGTAGTAGAGGCTTTTGATGTGCCTCAACAAGACCGTTATCAAATTGTTCATGAACATCCAGAAAATCATATGATTATTG
AGGATACTGGGTTAGGATTTAACCGAACTAAAAATCTTGTTGTTCTTTCAGTTACAAGTAAATCCCGACCGGAAGAGAAG
AAACAAAAATTTTACAGGCTGTTAGCTGAAAGACTGGAATCTGAGTGTGGTATCGCATCAACTGATTTAATTGTATCTAT
TGTTGAAAATGATAATGCTGACTGGAGTTTTGGACTTGGTGAGGCCCAATTTTTAACAGGTAAATTGTAG

Upstream 100 bases:

>100_bases
GGAAATTACTTTATTTTCTAAATGTAGCAGCTGCTTGGAAATAGCTGACACATTAACGAATGAAATTAAAAAGACTGTTG
TAGTAGAAGGAGGGGATTTT

Downstream 100 bases:

>100_bases
TTGAATACTACCCTCAAATGCTTGATTGAAGAAAAGGATAGAGAAACTAGGGTAGCGGAGCAAACCATGTGTTTGCTCCG
CTTTTTTATGTTTATAAAAG

Product: tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGFNRTKNLVVLSVTSKSRPEEK
KQKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGLGEAQFLTGKL

Sequences:

>Translated_129_residues
MPLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGFNRTKNLVVLSVTSKSRPEEK
KQKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGLGEAQFLTGKL
>Mature_128_residues
PLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGFNRTKNLVVLSVTSKSRPEEKK
QKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGLGEAQFLTGKL

Specific function: Putative target of gltR

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRDN_BACSU (P94502)

Other databases:

- EMBL:   U79494
- EMBL:   U93876
- EMBL:   AL009126
- PIR:   E69973
- RefSeq:   NP_390543.1
- ProteinModelPortal:   P94502
- SMR:   P94502
- EnsemblBacteria:   EBBACT00000002195
- GeneID:   937627
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26660
- NMPDR:   fig|224308.1.peg.2668
- GenoList:   BSU26660
- GeneTree:   EBGT00050000002087
- HOGENOM:   HBG342678
- OMA:   DWSFGFG
- ProtClustDB:   CLSK887426
- BioCyc:   BSUB:BSU26660-MONOMER
- InterPro:   IPR004370
- InterPro:   IPR014347
- Gene3D:   G3DSA:3.30.429.10

Pfam domain/function: PF01361 Tautomerase

EC number: NA

Molecular weight: Translated: 14682; Mature: 14551

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: ACT_SITE 2-2

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGF
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECCCCC
NRTKNLVVLSVTSKSRPEEKKQKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGLG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCEEECCC
EAQFLTGKL
CCCEEECCC
>Mature Secondary Structure 
PLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGF
CCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECCCCC
NRTKNLVVLSVTSKSRPEEKKQKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGLG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCEEECCC
EAQFLTGKL
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023181; 9308178; 9384377