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The map label for this gene is yqbB

Identifier: 16079670

GI number: 16079670

Start: 2685856

End: 2686773

Strand: Reverse

Name: yqbB

Synonym: BSU26170

Alternate gene names: 16079670

Gene position: 2686773-2685856 (Counterclockwise)

Preceding gene: 16079671

Following gene: 16079669

Centisome position: 63.73

GC content: 42.7

Gene sequence:

>918_bases
ATGAACAAAACGGATAAGCTATTGGAGAGTTTAAATGTCTTTATTCAAAAAGCCGAGGAAAATCAGTATAAGCAATTGGG
GGAGATGGTACCTGACTTTCCTGGCAAATCTAATATCCCCAAATATGTGGAGGAATATGAAAAAGGCATTGCCAGATTGC
TCAGACGCCAGCATAAGAAGTTTTTAGATGGTCTCAAAGGTTTTGTAAGCAAAGACTCAGAAGAGACGTTAAAAGCCCTT
CTAGTGTTTTTTACTCAGAACCTATTCGCGGAGGATGACTTCGAGGAAGAATTTCAGGAACTGACTGAGGGATTCCTGCA
ACAGACTATTGAAGAAATGGCTGAAGTAATCATGGATTCAATAGATCCAGAGGTGCCTTTTAAAGTCTTATCCAATCGTA
CGATTAATTGGATTAAGGATTGGTCAAAGAAGCTGGCTGAGATCATGAAGTTAAACACACATGAAGTGGTGGAGGACGTG
CTAACTAATGCTATCGAGAACGGTTCATCAATCCAGGACATTGAGTTGACTCTCAAAGACATGCCACAATTTGATAGGGA
GCGGGCGCGTACCACAGCCATCACAGAAGTGCTTGCCGCTTCCTCTGCCGCGCAGCATGAATCATATGCACAATCGCCGG
CAGTAAAGAAAAAGAAATGGCGGCACAGCGGAGGGAAGAAGAACAATCCTCGTGAAAATCACATTGATCTTGACGGTACA
GTCATTGGAGTAGATGAAGAATTTCAGATACCGGGCAGTAGCGAAACCTGCATGTTTCCGAGGGATCCTAAACTATCAAC
AAGGGAGCGGGTTAACTGCCATTGTGTTCTATCGCCTGTGGTAGATAGTAAGATTTTAGGCTTATCACCCGAAGAAAAAG
AAGAGATTCAAAGAGAAGTCTTAGCAAACATGGAATAA

Upstream 100 bases:

>100_bases
TTTCCGATCCTTTGGCTGCACTGTTTAAATCTAAGAACGGTACTCCTAATATGATCGGGTTATTAAAAGATATGCGGGAT
GTTCTGGAGGATTTGAAGAG

Downstream 100 bases:

>100_bases
AATAGTATAATGTCCTCATTACATATTAGGTGGGGAAAATATGAATTGGATGGAGTTTATCTCTTCAATAGTCAAATCAA
TCATTTGGCCGGTAGCAATA

Product: phage head morphogenesis protein; skin element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNKTDKLLESLNVFIQKAEENQYKQLGEMVPDFPGKSNIPKYVEEYEKGIARLLRRQHKKFLDGLKGFVSKDSEETLKAL
LVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDSIDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDV
LTNAIENGSSIQDIELTLKDMPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGT
VIGVDEEFQIPGSSETCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREVLANME

Sequences:

>Translated_305_residues
MNKTDKLLESLNVFIQKAEENQYKQLGEMVPDFPGKSNIPKYVEEYEKGIARLLRRQHKKFLDGLKGFVSKDSEETLKAL
LVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDSIDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDV
LTNAIENGSSIQDIELTLKDMPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGT
VIGVDEEFQIPGSSETCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREVLANME
>Mature_305_residues
MNKTDKLLESLNVFIQKAEENQYKQLGEMVPDFPGKSNIPKYVEEYEKGIARLLRRQHKKFLDGLKGFVSKDSEETLKAL
LVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDSIDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDV
LTNAIENGSSIQDIELTLKDMPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGT
VIGVDEEFQIPGSSETCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREVLANME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBB_BACSU (P45918)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   E69946
- RefSeq:   NP_390494.1
- EnsemblBacteria:   EBBACT00000000251
- GeneID:   937723
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26170
- NMPDR:   fig|224308.1.peg.2619
- GenoList:   BSU26170
- GeneTree:   EBGT00050000006675
- HOGENOM:   HBG339244
- OMA:   NTHEVVE
- ProtClustDB:   CLSK561253
- BioCyc:   BSUB:BSU26170-MONOMER
- InterPro:   IPR006528

Pfam domain/function: PF04233 Phage_Mu_F

EC number: NA

Molecular weight: Translated: 34921; Mature: 34921

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTDKLLESLNVFIQKAEENQYKQLGEMVPDFPGKSNIPKYVEEYEKGIARLLRRQHKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLDGLKGFVSKDSEETLKALLVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDVLTNAIENGSSIQDIELTLKD
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
VIGVDEEFQIPGSSETCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREV
EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECHHHCCHHCCCCCHHHHHHHHHH
LANME
HHCCC
>Mature Secondary Structure
MNKTDKLLESLNVFIQKAEENQYKQLGEMVPDFPGKSNIPKYVEEYEKGIARLLRRQHKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLDGLKGFVSKDSEETLKALLVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDVLTNAIENGSSIQDIELTLKD
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
VIGVDEEFQIPGSSETCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREV
EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECHHHCCHHCCCCCHHHHHHHHHH
LANME
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895