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The map label for this gene is yqbC

Identifier: 16079669

GI number: 16079669

Start: 2685162

End: 2685815

Strand: Reverse

Name: yqbC

Synonym: BSU26160

Alternate gene names: 16079669

Gene position: 2685815-2685162 (Counterclockwise)

Preceding gene: 16079670

Following gene: 255767606

Centisome position: 63.71

GC content: 29.66

Gene sequence:

>654_bases
ATGAATTGGATGGAGTTTATCTCTTCAATAGTCAAATCAATCATTTGGCCGGTAGCAATAATTATCTTGGTTTTTAAATT
AAAACAACCGGTTTCAAATTTGATCAGTACCTTGGCGAAAATTAAATATAAGGATTGGGAATTTGAATTCACTATTGACC
AAAAATTAGATAAGATTAGTTTCCAATTGAATAAAGAGAATCAATATGGAACTGATGATCAAAATCTAAAAGATTCATTA
AATTTAGAAAGTAATTCTGAAATCACTGAGGAAACACATTCCCATTATAATGAGAAGACAAGCATTAAAGGGGATAATGA
CTTACTACTAAAAATGGAAATGATTCGTTTATATGGAGCAGTGAAAAATCTTTATGAAAAAGTATCAGAAAAAGATGATG
CGGCAGATAAATCTCAAGGTATAGGCATGTTATACATGGTTGATTATTTGAAACGCCATAAAATTCTTAATGATTCATTT
GCGGAAAGCTTACTTGATATAATGAATATAGTTCATGACTTAGAGAAAAGTCATATTTCACAAAGCTACATTATGAATAA
ATTTTTCTGGAATGTAGATAAGAGTGTAAAAAGGTTAATGGAGATAACAAGCAATTATGTTGCTGAGAATACAGCTGGTG
AGACTTCTAATTAG

Upstream 100 bases:

>100_bases
GGCTTATCACCCGAAGAAAAAGAAGAGATTCAAAGAGAAGTCTTAGCAAACATGGAATAAAATAGTATAATGTCCTCATT
ACATATTAGGTGGGGAAAAT

Downstream 100 bases:

>100_bases
AAGTCTTTTCTTATTTTAAGGAGGTGAATAACATGCCAAGAGAATTGGTGAACGCAAAAATCACACATGTTTCTTATGTG
GATAAGGCTGCTAATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKISFQLNKENQYGTDDQNLKDSL
NLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGAVKNLYEKVSEKDDAADKSQGIGMLYMVDYLKRHKILNDSF
AESLLDIMNIVHDLEKSHISQSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN

Sequences:

>Translated_217_residues
MNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKISFQLNKENQYGTDDQNLKDSL
NLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGAVKNLYEKVSEKDDAADKSQGIGMLYMVDYLKRHKILNDSF
AESLLDIMNIVHDLEKSHISQSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN
>Mature_217_residues
MNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKISFQLNKENQYGTDDQNLKDSL
NLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGAVKNLYEKVSEKDDAADKSQGIGMLYMVDYLKRHKILNDSF
AESLLDIMNIVHDLEKSHISQSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBC_BACSU (P45919)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69946
- RefSeq:   NP_390493.1
- ProteinModelPortal:   P45919
- EnsemblBacteria:   EBBACT00000000498
- GeneID:   937712
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26160
- NMPDR:   fig|224308.1.peg.2618
- GenoList:   BSU26160
- GeneTree:   EBGT00050000006456
- BioCyc:   BSUB:BSU26160-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25252; Mature: 25252

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10a61f70)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
FQLNKENQYGTDDQNLKDSLNLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGA
HEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VKNLYEKVSEKDDAADKSQGIGMLYMVDYLKRHKILNDSFAESLLDIMNIVHDLEKSHIS
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
QSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
FQLNKENQYGTDDQNLKDSLNLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGA
HEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VKNLYEKVSEKDDAADKSQGIGMLYMVDYLKRHKILNDSFAESLLDIMNIVHDLEKSHIS
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
QSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895