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The map label for this gene is yqbD

Identifier: 255767606

GI number: 255767606

Start: 2684161

End: 2685129

Strand: Reverse

Name: yqbD

Synonym: BSU26150

Alternate gene names: 255767606

Gene position: 2685129-2684161 (Counterclockwise)

Preceding gene: 16079669

Following gene: 255767605

Centisome position: 63.69

GC content: 41.07

Gene sequence:

>969_bases
ATGCCAAGAGAATTGGTGAACGCAAAAATCACACATGTTTCTTATGTGGATAAGGCTGCTAATCAAAAGCAGTTCTTTAT
TGTGAAATCAGAAAAACAACCTGATTTTCAAAAGGAAGTCAGAATCCTTGCGAAAGAGGCAGACGAGCAAAAACTTGTTT
ACGGTATCGTGTATGAACCTGATACAGTGGACGCCCACGGAGATTTCATGACAGCTGCAGAAATCGAAAAGGCCGCTCAT
GGATTCCTGAAAGATGCTCGTCAAATCGACAAGCAACATGACTTTCAGGGTGGTGTTGGTGAGGTGGTTGAGTCCTATGT
CGCACCGGCAGACTTTGAAATGAATGGGGAAACCATTAAAAAGGGATCATGGGTCCTTGTCACAAAGGCTTCTGAGGAAG
TATGGGAGCAAATCAAAAAAGGCGAAATTACCGGTTATTCAATGGCAGGAACTGCTGAGACGATTGAAAAACAAGAAAAG
CCCGTTTCTCAAGAGAAAACAGATGAGAAAGGGCTATTTAATTTGCTCAAAAACTTTTTTGTTGGAAAACAACAGCAATC
ATATGAAGAGCCAGTTGCAAAGGCGGGCAGAAAATTTTCCGCTTCAAACCTGCAAGAAATTAAGAATGCTCATGCTGCCC
TTGGTAATTTACTGAGTCAGGTAGAAACAAAAGAGGGGGAAGAAGAAATGACTTCGGAGGAAGTAACTAAATCCATTCAA
GAAGCATTAGAGCCAATTAAGAAGCGGCTCGAGACATTAGAAAAAGAGGAAGAGCTTAATAAGAAAGATAAAGAAAAAGA
AGAAGAGACTGAAAAAGAGGGCGAGAAGTTGAAAAAGGCAATTTCAGAAGCTGTTCAACCGCTCGCTGATCGTATTGAAG
CAATCGAAAAAAGTCGCGGAACATCTAAGCAAACTGAAGAATCGGGTTCCGAACAAGTTCAAAAATCAATCTGGTCAGGG
TTGTTTTAA

Upstream 100 bases:

>100_bases
TAAAAAGGTTAATGGAGATAACAAGCAATTATGTTGCTGAGAATACAGCTGGTGAGACTTCTAATTAGAAGTCTTTTCTT
ATTTTAAGGAGGTGAATAAC

Downstream 100 bases:

>100_bases
TGGATAAGGAGGATACGAATGAGAAATCAAGAGGTTATTAATAAAGCAGAAATGACGCTTTCTACTTTAGAGAGCGGCGG
GATTATGAATCCTACTCAGG

Product: DNA wielding protein; skin element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MPRELVNAKITHVSYVDKAANQKQFFIVKSEKQPDFQKEVRILAKEADEQKLVYGIVYEPDTVDAHGDFMTAAEIEKAAH
GFLKDARQIDKQHDFQGGVGEVVESYVAPADFEMNGETIKKGSWVLVTKASEEVWEQIKKGEITGYSMAGTAETIEKQEK
PVSQEKTDEKGLFNLLKNFFVGKQQQSYEEPVAKAGRKFSASNLQEIKNAHAALGNLLSQVETKEGEEEMTSEEVTKSIQ
EALEPIKKRLETLEKEEELNKKDKEKEEETEKEGEKLKKAISEAVQPLADRIEAIEKSRGTSKQTEESGSEQVQKSIWSG
LF

Sequences:

>Translated_322_residues
MPRELVNAKITHVSYVDKAANQKQFFIVKSEKQPDFQKEVRILAKEADEQKLVYGIVYEPDTVDAHGDFMTAAEIEKAAH
GFLKDARQIDKQHDFQGGVGEVVESYVAPADFEMNGETIKKGSWVLVTKASEEVWEQIKKGEITGYSMAGTAETIEKQEK
PVSQEKTDEKGLFNLLKNFFVGKQQQSYEEPVAKAGRKFSASNLQEIKNAHAALGNLLSQVETKEGEEEMTSEEVTKSIQ
EALEPIKKRLETLEKEEELNKKDKEKEEETEKEGEKLKKAISEAVQPLADRIEAIEKSRGTSKQTEESGSEQVQKSIWSG
LF
>Mature_321_residues
PRELVNAKITHVSYVDKAANQKQFFIVKSEKQPDFQKEVRILAKEADEQKLVYGIVYEPDTVDAHGDFMTAAEIEKAAHG
FLKDARQIDKQHDFQGGVGEVVESYVAPADFEMNGETIKKGSWVLVTKASEEVWEQIKKGEITGYSMAGTAETIEKQEKP
VSQEKTDEKGLFNLLKNFFVGKQQQSYEEPVAKAGRKFSASNLQEIKNAHAALGNLLSQVETKEGEEEMTSEEVTKSIQE
ALEPIKKRLETLEKEEELNKKDKEKEEETEKEGEKLKKAISEAVQPLADRIEAIEKSRGTSKQTEESGSEQVQKSIWSGL
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdF

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBD_BACSU (P45920)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   G69946
- RefSeq:   NP_390492.2
- EnsemblBacteria:   EBBACT00000002156
- GeneID:   937736
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26150
- NMPDR:   fig|224308.1.peg.2617
- GenoList:   BSU26150
- GeneTree:   EBGT00050000005968
- HOGENOM:   HBG344664
- BioCyc:   BSUB:BSU26150-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36262; Mature: 36131

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRELVNAKITHVSYVDKAANQKQFFIVKSEKQPDFQKEVRILAKEADEQKLVYGIVYEP
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECC
DTVDAHGDFMTAAEIEKAAHGFLKDARQIDKQHDFQGGVGEVVESYVAPADFEMNGETIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEC
KGSWVLVTKASEEVWEQIKKGEITGYSMAGTAETIEKQEKPVSQEKTDEKGLFNLLKNFF
CCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
VGKQQQSYEEPVAKAGRKFSASNLQEIKNAHAALGNLLSQVETKEGEEEMTSEEVTKSIQ
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EALEPIKKRLETLEKEEELNKKDKEKEEETEKEGEKLKKAISEAVQPLADRIEAIEKSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSKQTEESGSEQVQKSIWSGLF
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRELVNAKITHVSYVDKAANQKQFFIVKSEKQPDFQKEVRILAKEADEQKLVYGIVYEP
CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECC
DTVDAHGDFMTAAEIEKAAHGFLKDARQIDKQHDFQGGVGEVVESYVAPADFEMNGETIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEC
KGSWVLVTKASEEVWEQIKKGEITGYSMAGTAETIEKQEKPVSQEKTDEKGLFNLLKNFF
CCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
VGKQQQSYEEPVAKAGRKFSASNLQEIKNAHAALGNLLSQVETKEGEEEMTSEEVTKSIQ
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EALEPIKKRLETLEKEEELNKKDKEKEEETEKEGEKLKKAISEAVQPLADRIEAIEKSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSKQTEESGSEQVQKSIWSGLF
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895