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The map label for this gene is comGC

Identifier: 16079527

GI number: 16079527

Start: 2557673

End: 2557969

Strand: Reverse

Name: comGC

Synonym: BSU24710

Alternate gene names: 16079527

Gene position: 2557969-2557673 (Counterclockwise)

Preceding gene: 16079528

Following gene: 16079526

Centisome position: 60.68

GC content: 38.72

Gene sequence:

>297_bases
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Upstream 100 bases:

>100_bases
ATGATTTATGGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCA
AATGTGAAAGGAAGAGGCTG

Downstream 100 bases:

>100_bases
ATTAAACGAGGAGAAGGGGTTTACCCTTTTAGAAAGTTTGCTTGTGTTAAGCCTTGCCTCTATCCTCCTGGTGGCCGTCT
TCACTACACTTCCTCCTGCT

Product: pilin-like component of the DNA transport membrane platform

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Sequences:

>Translated_98_residues
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
>Mature_98_residues
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Specific function: Required for transformation and DNA binding

COG id: COG4537

COG function: function code U; Competence protein ComGC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein. Cell surface. Note=The unprocessed form is an integral membrane protein with its C-terminus outside the membrane. Upon cleavage, it is translocated to the outer face of the membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComGC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMGC_BACSU (P25955)

Other databases:

- EMBL:   M29691
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D30338
- RefSeq:   NP_390351.1
- ProteinModelPortal:   P25955
- SMR:   P25955
- EnsemblBacteria:   EBBACT00000002979
- GeneID:   938526
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU24710
- NMPDR:   fig|224308.1.peg.2475
- GenoList:   BSU24710
- GeneTree:   EBGT00050000002836
- HOGENOM:   HBG697300
- OMA:   AYKEYND
- ProtClustDB:   CLSK887564
- BioCyc:   BSUB:BSU24710-MONOMER
- GO:   GO:0006810
- InterPro:   IPR016940
- InterPro:   IPR012902
- InterPro:   IPR001120
- PIRSF:   PIRSF029928
- TIGRFAMs:   TIGR02532

Pfam domain/function: PF07963 N_methyl

EC number: NA

Molecular weight: Translated: 10850; Mature: 10850

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10ea5a48)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQTPSLADLQSEGYVKKDAVCPNGKRIIITGGEVKVEH
CCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCEEEECH
>Mature Secondary Structure
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQTPSLADLQSEGYVKKDAVCPNGKRIIITGGEVKVEH
CCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2507524; 8969508; 9384377; 1968455; 9422590; 9723928; 11744713