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The map label for this gene is yqkC

Identifier: 16079422

GI number: 16079422

Start: 2461621

End: 2461860

Strand: Reverse

Name: yqkC

Synonym: BSU23650

Alternate gene names: 16079422

Gene position: 2461860-2461621 (Counterclockwise)

Preceding gene: 16079423

Following gene: 16079420

Centisome position: 58.4

GC content: 42.92

Gene sequence:

>240_bases
GTGGAACAAAAGCTGAAGGCAATGAAGAACACAGCACAAAATAAAACGTGGGTATCCTTCCTGAATCAAAACCATCCTTA
TACCTTGCTTCACTGGTCAATCGGAGGAGCAGAGTCCATCAAGAAAGATGTCTGGCTATTGCAGGATGAAATGACCTTCG
AGACGCAGGAGTTTACAACGATAGATCTTGCGATTGAATGGATCAGAGAAAATATGGATGGCATTACCGACGTTCTGTAA

Upstream 100 bases:

>100_bases
GATCGATTACAATGAAAAAGCCAAAACATTGGCGCTGAAAAGCCCGGCTGAAATGCTCAGCCCCAGAATGAGCATATTAG
TAAAGTAGGAGACGCGAAAC

Downstream 100 bases:

>100_bases
CATAAAAAAGCGAAAGAGCCGAAGAGGCCTTTCGCTTTTTTATTCTGTTGAATCATTCATGTTGTCTAAAAACTCCTGCA
CTGTTTTTCGGTACGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTTIDLAIEWIRENMDGITDVL

Sequences:

>Translated_79_residues
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTTIDLAIEWIRENMDGITDVL
>Mature_79_residues
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTTIDLAIEWIRENMDGITDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQKC_BACSU (P54566)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   E69966
- RefSeq:   NP_390246.1
- EnsemblBacteria:   EBBACT00000003671
- GeneID:   938711
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23650
- NMPDR:   fig|224308.1.peg.2370
- GenoList:   BSU23650
- GeneTree:   EBGT00050000001340
- HOGENOM:   HBG314170
- OMA:   KTWVSFL
- ProtClustDB:   CLSK887527
- BioCyc:   BSUB:BSU23650-MONOMER
- InterPro:   IPR020157
- ProDom:   PD058987

Pfam domain/function: PF10827 DUF2552

EC number: NA

Molecular weight: Translated: 9287; Mature: 9287

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTT
CCHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHH
IDLAIEWIRENMDGITDVL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTT
CCHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHH
IDLAIEWIRENMDGITDVL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377