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The map label for this gene is ypuD

Identifier: 16079387

GI number: 16079387

Start: 2431737

End: 2432081

Strand: Reverse

Name: ypuD

Synonym: BSU23300

Alternate gene names: 16079387

Gene position: 2432081-2431737 (Counterclockwise)

Preceding gene: 16079388

Following gene: 16079385

Centisome position: 57.69

GC content: 37.1

Gene sequence:

>345_bases
ATGGGAAGAATAAAAACCAAGATTACCATTCTGTTAGTGCTTTTGCTTTTACTTGCAGGCGGTTATATGTACATAAATGA
TATTGAGCTGAAGGATGTTCCGACAGCAATTGGACAAACCTTGTCCTCGGAAGAAGAGGAATACACCATCCAGGAATATA
AAGTGACGAAAATTGACGGCTCAGAGTATCATGGAGTAGCAGAAAACGGAACGAAAATCATCTTCAACGGAAAAAAATTA
AATCAGGATTTATCTGATATAAAAGAAGGTGACAAGATTAAGGCTTACTTCAGCAAATCAAAGCGGATCGACGGATTAAT
CAAGGTTGCAAAAGTGAATGATTAA

Upstream 100 bases:

>100_bases
CGTTATATTAATAATTTACGAGAATTTACGGTTTTTTATTCATGAAAAAAAGGAATAACTCATATGAATGAATAGATTCA
TATTGGCTGGAGGTTTAGAA

Downstream 100 bases:

>100_bases
AAAACATCACCTTTCGGATCGAAGGGTGATGTTTTGTTTTTCTCAAATTGTAAGTTTATTTCATTGCGTACTTTAAAAAG
GATCGCTATAATAACCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX4

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MGRIKTKITILLVLLLLLAGGYMYINDIELKDVPTAIGQTLSSEEEEYTIQEYKVTKIDGSEYHGVAENGTKIIFNGKKL
NQDLSDIKEGDKIKAYFSKSKRIDGLIKVAKVND

Sequences:

>Translated_114_residues
MGRIKTKITILLVLLLLLAGGYMYINDIELKDVPTAIGQTLSSEEEEYTIQEYKVTKIDGSEYHGVAENGTKIIFNGKKL
NQDLSDIKEGDKIKAYFSKSKRIDGLIKVAKVND
>Mature_113_residues
GRIKTKITILLVLLLLLAGGYMYINDIELKDVPTAIGQTLSSEEEEYTIQEYKVTKIDGSEYHGVAENGTKIIFNGKKLN
QDLSDIKEGDKIKAYFSKSKRIDGLIKVAKVND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPUD_BACSU (P17616)

Other databases:

- EMBL:   L09228
- EMBL:   X51510
- EMBL:   AL009126
- PIR:   S45541
- RefSeq:   NP_390211.1
- EnsemblBacteria:   EBBACT00000002639
- GeneID:   938943
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23300
- NMPDR:   fig|224308.1.peg.2334
- GenoList:   BSU23300
- GeneTree:   EBGT00050000001144
- HOGENOM:   HBG338145
- OMA:   MGRIKTK
- ProtClustDB:   CLSK887515
- BioCyc:   BSUB:BSU23300-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12754; Mature: 12623

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIKTKITILLVLLLLLAGGYMYINDIELKDVPTAIGQTLSSEEEEYTIQEYKVTKIDG
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEEEEEECC
SEYHGVAENGTKIIFNGKKLNQDLSDIKEGDKIKAYFSKSKRIDGLIKVAKVND
CCCCCCCCCCCEEEEECCHHCCCHHHHHCCCEEHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GRIKTKITILLVLLLLLAGGYMYINDIELKDVPTAIGQTLSSEEEEYTIQEYKVTKIDG
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEEEEEECC
SEYHGVAENGTKIIFNGKKLNQDLSDIKEGDKIKAYFSKSKRIDGLIKVAKVND
CCCCCCCCCCCEEEEECCHHCCCHHHHHCCCEEHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377