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The map label for this gene is ypjH

Identifier: 16079303

GI number: 16079303

Start: 2357078

End: 2358211

Strand: Reverse

Name: ypjH

Synonym: BSU22460

Alternate gene names: 16079303

Gene position: 2358211-2357078 (Counterclockwise)

Preceding gene: 255767484

Following gene: 16079302

Centisome position: 55.94

GC content: 42.77

Gene sequence:

>1134_bases
ATGAGAAAACTAAAAATAGGAATCACATGCTATCCGAGCGTTGGAGGCTCAGGTATCATTGCGACAGAACTGGGGAAGCA
GCTTGCTGAAAAGGGACATGAAATCCATTTCATCACATCAAGCATTCCGTTTAGACTGAATACATATCATCCCAATATTC
ATTTTCATGAAGTTGAGGTTAATCAATATGCTGTTTTTAAGTATCCTCCGTATGATTTGACATTGGCAAGCAAAATCGCT
GAGGTGGCGGAACGGGAGAATTTAGACATTATCCATGCTCACTATGCTCTCCCGCATGCCGTTTGCGCCTATCTTGCAAA
ACAAATGCTGAAACGCAATATCGGCATTGTTACCACTTTGCATGGCACGGATATCACGGTGTTAGGTTATGATCCGTCTC
TAAAAGATCTGATCCGTTTTGCTATTGAGTCATCAGACAGGGTGACGGCCGTCTCCTCAGCGCTTGCGGCTGAAACATAC
GATTTAATTAAACCGGAGAAAAAAATTGAAACGATTTATAACTTTATAGACGAGCGCGTGTATCTGAAGAAAAACACAGC
GGCAATTAAAGAGAAACATGGAATTTTACCAGATGAAAAAGTCGTCATCCATGTGTCCAACTTCAGAAAAGTTAAACGCG
TGCAGGATGTCATCCGTGTGTTCCGCAATATCGCTGGCAAAACGAAAGCGAAGCTGCTTTTAGTCGGAGACGGTCCGGAG
AAATCGACAGCCTGCGAGCTTATCAGAAAATATGGCTTGGAAGACCAAGTCTTAATGCTTGGAAATCAAGACCGTGTTGA
AGATCTTTATTCTATTAGCGATTTGAAGCTGCTGCTATCTGAAAAAGAAAGCTTTGGCCTTGTCCTGCTTGAAGCGATGG
CTTGCGGAGTGCCTTGTATTGGAACAAACATTGGCGGTATCCCTGAGGTTATAAAAAACAATGTGAGCGGATTTTTGGTG
GATGTCGGTGATGTTACGGCCGCAACAGCCCGCGCGATGAGCATTTTAGAAGATGAACAGCTAAGCAATCGTTTTACAAA
GGCGGCAATAGAGATGCTTGAAAATGAATTTTCTTCTAAAAAAATTGTCAGCCAGTATGAACAGATTTATGCCGATTTAG
CAGAACCGGAGTGA

Upstream 100 bases:

>100_bases
GAGAAAAGCTTTACGGTAAAGAAGCGGGCGTGGAGTATGCCGAAGGTTTCTTTTCCAAACGGATGCTGATGCTTGATCAT
GATGTGCTTGGGGGCGAACA

Downstream 100 bases:

>100_bases
TCACATGGAAAAAGTTTTTATCAAAGCACTTCCCGTGCTCCGCATCTTAATCGAAGCGGGCCATCAGGCTTATTTTGTCG
GGGGCGCAGTTCGTGACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEVEVNQYAVFKYPPYDLTLASKIA
EVAERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETY
DLIKPEKKIETIYNFIDERVYLKKNTAAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPE
KSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLV
DVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADLAEPE

Sequences:

>Translated_377_residues
MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEVEVNQYAVFKYPPYDLTLASKIA
EVAERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETY
DLIKPEKKIETIYNFIDERVYLKKNTAAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPE
KSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLV
DVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADLAEPE
>Mature_377_residues
MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEVEVNQYAVFKYPPYDLTLASKIA
EVAERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETY
DLIKPEKKIETIYNFIDERVYLKKNTAAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPE
KSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLV
DVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADLAEPE

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family

Homologues:

Organism=Escherichia coli, GI1788357, Length=306, Percent_Identity=27.4509803921569, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=386, Percent_Identity=23.3160621761658, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPJH_BACSU (P42982)

Other databases:

- EMBL:   L38424
- EMBL:   L47709
- EMBL:   AL009126
- PIR:   G69937
- RefSeq:   NP_390127.1
- ProteinModelPortal:   P42982
- SMR:   P42982
- EnsemblBacteria:   EBBACT00000000372
- GeneID:   939029
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22460
- NMPDR:   fig|224308.1.peg.2250
- GenoList:   BSU22460
- GeneTree:   EBGT00070000031977
- HOGENOM:   HBG729615
- OMA:   VKCIGDI
- PhylomeDB:   P42982
- ProtClustDB:   CLSK2391275
- BioCyc:   BSUB:BSU22460-MONOMER
- GO:   GO:0005488
- InterPro:   IPR001296
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF00534 Glycos_transf_1

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41979; Mature: 41979

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEVEV
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEEEEE
NQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTL
CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEE
HGTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETYDLIKPEKKIETIYNFIDERV
CCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEE
YLKKNTAAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPE
EEECCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
KSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCI
HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEE
GTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSK
CCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVSQYEQIYADLAEPE
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYHPNIHFHEVEV
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEEEEE
NQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTL
CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEE
HGTDITVLGYDPSLKDLIRFAIESSDRVTAVSSALAAETYDLIKPEKKIETIYNFIDERV
CCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEE
YLKKNTAAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPE
EEECCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
KSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCI
HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEE
GTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSK
CCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVSQYEQIYADLAEPE
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377