Click here to switch to the map view.

The map label for this gene is yppE

Identifier: 16079285

GI number: 16079285

Start: 2338809

End: 2339180

Strand: Reverse

Name: yppE

Synonym: BSU22270

Alternate gene names: 16079285

Gene position: 2339180-2338809 (Counterclockwise)

Preceding gene: 16079286

Following gene: 16079283

Centisome position: 55.49

GC content: 40.32

Gene sequence:

>372_bases
TTGCTATCACAAACTTTGCTGGAAATGACCGAGCAAATGATTGAAGTTGCTGAAAAAGGCGCTGATCGGTATCAGGAAGG
AAAAAACAGTAATCATTCTTATGATTTTTTTGAGACGATAAAGCCTGCAGTTGAAGAGAATGATGAACTGGCTGCTCGCT
GGGCAGAGGGTGCTCTTGAATTGATAAAAGTCCGCCGGCCAAAATATGTGCATAAAGAGCAAATTGAGGCCGTAAAGGAT
AATTTCCTGGAATTGGTCCTTCAATCTTATGTTCATCATATTCATAAAAAACGATTCAAGGACATCACTGAGTCAGTCCT
TTATACATTGCACGCAGTAAAGGATGAAATTGCAAGAGAAGACAGCCGGTAA

Upstream 100 bases:

>100_bases
GTATCAATCGCCTGAACACAGGTATGCGTTTGAGAAGGTATACCGCATCGGCTGAATTTGTGAGTGAAATTTGGTACGAT
AGGCATTGAGGTGAAAGATA

Downstream 100 bases:

>100_bases
AAGGCTGTCTTCTTTTCGTTTTTATAGGGGGCCGGACGTTAATTCATCTCATATGCCGGGCTTTCTGCTCCATTTGCTTC
GAGAACCTTCATACTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALELIKVRRPKYVHKEQIEAVKD
NFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIAREDSR

Sequences:

>Translated_123_residues
MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALELIKVRRPKYVHKEQIEAVKD
NFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIAREDSR
>Mature_123_residues
MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALELIKVRRPKYVHKEQIEAVKD
NFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIAREDSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPPE_BACSU (P50833)

Other databases:

- EMBL:   L47838
- EMBL:   AL009126
- PIR:   B69940
- RefSeq:   NP_390109.1
- PDB:   2HFI
- PDB:   2IM8
- PDBsum:   2HFI
- PDBsum:   2IM8
- ProteinModelPortal:   P50833
- SMR:   P50833
- EnsemblBacteria:   EBBACT00000001856
- GeneID:   939047
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22270
- NMPDR:   fig|224308.1.peg.2232
- GenoList:   BSU22270
- GeneTree:   EBGT00050000003039
- HOGENOM:   HBG338128
- OMA:   TESVLYT
- ProtClustDB:   CLSK887491
- BioCyc:   BSUB:BSU22270-MONOMER
- InterPro:   IPR014913

Pfam domain/function: PF08807 DUF1798

EC number: NA

Molecular weight: Translated: 14460; Mature: 14460

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIARE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSR
CCC
>Mature Secondary Structure
MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIARE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377