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The map label for this gene is ypgQ

Identifier: 16079248

GI number: 16079248

Start: 2303920

End: 2304537

Strand: Reverse

Name: ypgQ

Synonym: BSU21890

Alternate gene names: 16079248

Gene position: 2304537-2303920 (Counterclockwise)

Preceding gene: 16079249

Following gene: 16079247

Centisome position: 54.67

GC content: 45.47

Gene sequence:

>618_bases
GTGAAGGAATTGAAGCAGGCAGAGCAAATCAGGACATGGGTTCAATCTATCCTGACTGACGAAAGCTCTGGACATGACTG
GCATCATGTATCAAGAGTAGCAGATCTTGCAGCGTATATTGGAGAAAAGGAAAAAGCGGATTTGTTCATTGTTGAAACGG
CGGCTTTGGTTCATGATTTAATTGATGTGAAGCTGCCTGACACGGTCAGGCTTTCTGTGAGCGAAGTATATGATCAGCTC
GTTTTTTTCGGAGTAGGAAAAGAGAATGCTGACAGGGTGATTCATATTATAACAAGGATGTCCTTTCGGGACAGGGGGAA
ATTGGCGAAGGAGCCGCTCTCAATTGAAGGAAAAGCTGTACAGGATGCTGACAGACTTGATGCGATTGGTGCTGTCGGCA
TTGCGAGAGCTTTCATGTTTGCGGGCGCAAAAGGGCATGGCCTTTATGGAGATGAGCAAAGCGCCTACGCTCATTTTTTT
CATAAGCTGCTGCGGCTGAAAGATATGATGAATACAGACACTGCACGGGAACTGGCAGAAGAAAGACACAATTTTATGCT
TCAATTTGTCCGCCAATTAGAAAAAGACATACCCGGGATTGATGCCGAAACGTCGTAA

Upstream 100 bases:

>100_bases
AAATGGAGAAATCGTTGGCCGTTATTCACCAAATACAAATCCGAAAGAGTTGGAAGACGATATCGTGAAGCTATTAGAGC
AATAAAAAGAGGGTGTTTTT

Downstream 100 bases:

>100_bases
TAGAAGGCTTGGAGCGACTATGATAGAATAAGTCACAGATATGCTATAGGAGGACGATCATGAAGATAAAATCAATTGAA
CCTACACCAAGCCCGAATAC

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFIVETAALVHDLIDVKLPDTVRLSVSEVYDQL
VFFGVGKENADRVIHIITRMSFRDRGKLAKEPLSIEGKAVQDADRLDAIGAVGIARAFMFAGAKGHGLYGDEQSAYAHFF
HKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKDIPGIDAETS

Sequences:

>Translated_205_residues
MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFIVETAALVHDLIDVKLPDTVRLSVSEVYDQL
VFFGVGKENADRVIHIITRMSFRDRGKLAKEPLSIEGKAVQDADRLDAIGAVGIARAFMFAGAKGHGLYGDEQSAYAHFF
HKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKDIPGIDAETS
>Mature_205_residues
MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFIVETAALVHDLIDVKLPDTVRLSVSEVYDQL
VFFGVGKENADRVIHIITRMSFRDRGKLAKEPLSIEGKAVQDADRLDAIGAVGIARAFMFAGAKGHGLYGDEQSAYAHFF
HKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKDIPGIDAETS

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain

Homologues:

Organism=Escherichia coli, GI1788273, Length=210, Percent_Identity=30.4761904761905, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPGQ_BACSU (P54168)

Other databases:

- EMBL:   L77246
- EMBL:   AL009126
- PIR:   E69935
- RefSeq:   NP_390072.1
- ProteinModelPortal:   P54168
- SMR:   P54168
- EnsemblBacteria:   EBBACT00000002780
- GeneID:   939080
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21890
- NMPDR:   fig|224308.1.peg.2195
- GenoList:   BSU21890
- GeneTree:   EBGT00050000000855
- HOGENOM:   HBG684073
- OMA:   HDTIDEK
- PhylomeDB:   P54168
- ProtClustDB:   CLSK887470
- BioCyc:   BSUB:BSU21890-MONOMER
- InterPro:   IPR003607
- SMART:   SM00471

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23123; Mature: 23123

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFIVETAALVHDL
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
IDVKLPDTVRLSVSEVYDQLVFFGVGKENADRVIHIITRMSFRDRGKLAKEPLSIEGKAV
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCH
QDADRLDAIGAVGIARAFMFAGAKGHGLYGDEQSAYAHFFHKLLRLKDMMNTDTARELAE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ERHNFMLQFVRQLEKDIPGIDAETS
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFIVETAALVHDL
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
IDVKLPDTVRLSVSEVYDQLVFFGVGKENADRVIHIITRMSFRDRGKLAKEPLSIEGKAV
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCH
QDADRLDAIGAVGIARAFMFAGAKGHGLYGDEQSAYAHFFHKLLRLKDMMNTDTARELAE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ERHNFMLQFVRQLEKDIPGIDAETS
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377