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The map label for this gene is yosT

Identifier: 16079059

GI number: 16079059

Start: 2158724

End: 2159173

Strand: Reverse

Name: yosT

Synonym: BSU20010

Alternate gene names: 16079059

Gene position: 2159173-2158724 (Counterclockwise)

Preceding gene: 16079060

Following gene: 255767465

Centisome position: 51.22

GC content: 33.56

Gene sequence:

>450_bases
ATGAAAATAACTATTGAAGAATTACCTGAATTAAGGATTGCTTATTTCCGAAACGTTGGAGAGTATGGTGGTAAGCAAAA
CAAAGAACTAATGGAATCTTTTAAAAAGTGGGCACAGTTGAATGGTGTATTTCATAACTCTGTAATTTTAGGAATTCCAC
AAGATGATCCAAGTATTACTCCTAAAGAGGAATGCCGTTATGATGTTGGTGTTGTATTAAATGAAGATTTTAATGTGCTG
CAACCAGCTCAAGTTGGTAAGTTACCTGGAGGGAAATACGCTGTTTTCTTGCTTGACCATACAAAAGAGGCAGTAAGTGA
ATTTTGGGGCAATATTTTCTCTGAAATAGAAAAAAATAGTCTAACTATGAGAGGAGAACCAATTATAGAGAGATATACTT
CACAAATGATTGATAATCACTTATGTGAAGTATTAGTTCCTATCCAATAA

Upstream 100 bases:

>100_bases
AAGTAATTGGATTTTGTATTTGAAATATAGATTATTTTAAAAGTCATCTTGAAAAACATTTTTAATCATATTACCTTTTT
CTAGGAAAGGGGATTAAAAT

Downstream 100 bases:

>100_bases
AGAAGGTGGGTAATTTCCCACCTCCTATATATGTATAAGTTAAATGCTCTGAATTAACTCGTTTATTTTATCAAGATTAA
TGGTAATGTTGCATATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKITIEELPELRIAYFRNVGEYGGKQNKELMESFKKWAQLNGVFHNSVILGIPQDDPSITPKEECRYDVGVVLNEDFNVL
QPAQVGKLPGGKYAVFLLDHTKEAVSEFWGNIFSEIEKNSLTMRGEPIIERYTSQMIDNHLCEVLVPIQ

Sequences:

>Translated_149_residues
MKITIEELPELRIAYFRNVGEYGGKQNKELMESFKKWAQLNGVFHNSVILGIPQDDPSITPKEECRYDVGVVLNEDFNVL
QPAQVGKLPGGKYAVFLLDHTKEAVSEFWGNIFSEIEKNSLTMRGEPIIERYTSQMIDNHLCEVLVPIQ
>Mature_149_residues
MKITIEELPELRIAYFRNVGEYGGKQNKELMESFKKWAQLNGVFHNSVILGIPQDDPSITPKEECRYDVGVVLNEDFNVL
QPAQVGKLPGGKYAVFLLDHTKEAVSEFWGNIFSEIEKNSLTMRGEPIIERYTSQMIDNHLCEVLVPIQ

Specific function: Unknown

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOST_BACSU (O34775)

Other databases:

- EMBL:   AF012906
- EMBL:   AL009126
- RefSeq:   NP_389882.1
- ProteinModelPortal:   O34775
- SMR:   O34775
- EnsemblBacteria:   EBBACT00000001185
- GeneID:   939471
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20010
- NMPDR:   fig|224308.1.peg.2005
- GenoList:   BSU20010
- GeneTree:   EBGT00050000000097
- HOGENOM:   HBG417284
- OMA:   LFNENSI
- ProtClustDB:   CLSK377045
- BioCyc:   BSUB:BSU20010-MONOMER
- InterPro:   IPR010499
- InterPro:   IPR011256
- SMART:   SM00871

Pfam domain/function: PF06445 AraC_E_bind; SSF55136 Bac_reg_effector

EC number: NA

Molecular weight: Translated: 17016; Mature: 17016

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITIEELPELRIAYFRNVGEYGGKQNKELMESFKKWAQLNGVFHNSVILGIPQDDPSIT
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCC
PKEECRYDVGVVLNEDFNVLQPAQVGKLPGGKYAVFLLDHTKEAVSEFWGNIFSEIEKNS
CHHHCCEECCEEECCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
LTMRGEPIIERYTSQMIDNHLCEVLVPIQ
CCCCCCHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MKITIEELPELRIAYFRNVGEYGGKQNKELMESFKKWAQLNGVFHNSVILGIPQDDPSIT
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCC
PKEECRYDVGVVLNEDFNVLQPAQVGKLPGGKYAVFLLDHTKEAVSEFWGNIFSEIEKNS
CHHHCCEECCEEECCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
LTMRGEPIIERYTSQMIDNHLCEVLVPIQ
CCCCCCHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679200; 9384377