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The map label for this gene is yodP

Identifier: 16079028

GI number: 16079028

Start: 2140898

End: 2141725

Strand: Reverse

Name: yodP

Synonym: BSU19700

Alternate gene names: 16079028

Gene position: 2141725-2140898 (Counterclockwise)

Preceding gene: 16079029

Following gene: 16079027

Centisome position: 50.8

GC content: 45.65

Gene sequence:

>828_bases
ATGCTCAAGTCAATAAAGAGTAGCGGTGTCACAGCAGTTTTGGACCATGACGGCTTTAATAAACGAATCAGAGTGGTTCG
TTATGACGGAGCCATTGAGAAGGCCCTGCCGGATATCGTGGCAGCGGCAAAAGAAGAGAATGCAGAAAAAATCATTGTCT
ATGCGAAGCAGCATGATGAGCCGATCCTTGCCAAACAATTATTTGCGCCGGAGGGCTATCTAAAGGGCTATTATCTCGGC
CATTCGGCTTGTGTCATGGTACGTTACCTTTCAGAAAGCCGGAGACAAACAGATTCTTATACAGAGGAACAGGAGATCAT
CGAAGCCATATATCGCACAGCGCCCCGTCTTCGCAACGACAGTACACCCGTTTTTACGATGAGAAAAGCAGAAACAAACG
ACATGTACCAGCTATCGATGCTGTATAAAAAAGTATTCCGCACGTACCCAACCCCGGTATTTGACCCCGCTTATATTGAA
AAGACGATGAATGCAAATACGGTGTATTATATCATGCTTGATCATGACCGCCTGATCAGCGCAGCAAGCGCAGAAATCAA
TCCAGAGCTTGGGCATGCAGAAATAACCGATTGCGCTGTGCTGCCGGAATATCGCGGCCATTCGTTAACAAGCTTTTTAA
TCGAGGCGTTAGAAAAAGAAATGGCTGGAGAGGATATCGTTCATGTGTTTTCTCTCGCCCGTGCTTCGTCTTTTGGGATG
AATGCTGTGTTGTACCATTCAGGTTATCAGTATGGCGGAAGGCTGATCAATAATTGCTTTATAGCCGAAGGCCTTGAAAA
CATGAATATTTGGTGCAAGCAACTGTAA

Upstream 100 bases:

>100_bases
AATGAATACATTGAGGTTGAAGCCATGATAGAATCTGCTAAAATTATTGCACTTTTTGTCATGGATTGGTGCGGCCTTCA
TACAGATGGGGAGGATGCGG

Downstream 100 bases:

>100_bases
GTCAAAATATGCGCGAGGAGGAGTTCGTTTGAAAAACAAATGGTATAAACCGAAACGGCATTGGAAGGAGATCGAGTTAT
GGAAGGACGTTCCGGAAGAG

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKALPDIVAAAKEENAEKIIVYAKQHDEPILAKQLFAPEGYLKGYYLG
HSACVMVRYLSESRRQTDSYTEEQEIIEAIYRTAPRLRNDSTPVFTMRKAETNDMYQLSMLYKKVFRTYPTPVFDPAYIE
KTMNANTVYYIMLDHDRLISAASAEINPELGHAEITDCAVLPEYRGHSLTSFLIEALEKEMAGEDIVHVFSLARASSFGM
NAVLYHSGYQYGGRLINNCFIAEGLENMNIWCKQL

Sequences:

>Translated_275_residues
MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKALPDIVAAAKEENAEKIIVYAKQHDEPILAKQLFAPEGYLKGYYLG
HSACVMVRYLSESRRQTDSYTEEQEIIEAIYRTAPRLRNDSTPVFTMRKAETNDMYQLSMLYKKVFRTYPTPVFDPAYIE
KTMNANTVYYIMLDHDRLISAASAEINPELGHAEITDCAVLPEYRGHSLTSFLIEALEKEMAGEDIVHVFSLARASSFGM
NAVLYHSGYQYGGRLINNCFIAEGLENMNIWCKQL
>Mature_275_residues
MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKALPDIVAAAKEENAEKIIVYAKQHDEPILAKQLFAPEGYLKGYYLG
HSACVMVRYLSESRRQTDSYTEEQEIIEAIYRTAPRLRNDSTPVFTMRKAETNDMYQLSMLYKKVFRTYPTPVFDPAYIE
KTMNANTVYYIMLDHDRLISAASAEINPELGHAEITDCAVLPEYRGHSLTSFLIEALEKEMAGEDIVHVFSLARASSFGM
NAVLYHSGYQYGGRLINNCFIAEGLENMNIWCKQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YODP_BACSU (O34895)

Other databases:

- EMBL:   AF006665
- EMBL:   AF015775
- EMBL:   AL009126
- PIR:   C69904
- RefSeq:   NP_389851.1
- ProteinModelPortal:   O34895
- EnsemblBacteria:   EBBACT00000002365
- GeneID:   940057
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19700
- NMPDR:   fig|224308.1.peg.1974
- GenoList:   BSU19700
- GeneTree:   EBGT00050000002268
- HOGENOM:   HBG420740
- OMA:   TIARSIS
- ProtClustDB:   CLSK887437
- BioCyc:   BSUB:BSU19700-MONOMER
- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR022525
- Gene3D:   G3DSA:3.40.630.30
- TIGRFAMs:   TIGR03827

Pfam domain/function: PF00583 Acetyltransf_1; SSF55729 Acyl_CoA_acyltransferase

EC number: NA

Molecular weight: Translated: 31221; Mature: 31221

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS51186 GNAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKALPDIVAAAKEENAEKIIVYAKQHDE
CCCCCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PILAKQLFAPEGYLKGYYLGHSACVMVRYLSESRRQTDSYTEEQEIIEAIYRTAPRLRND
CHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
STPVFTMRKAETNDMYQLSMLYKKVFRTYPTPVFDPAYIEKTMNANTVYYIMLDHDRLIS
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHH
AASAEINPELGHAEITDCAVLPEYRGHSLTSFLIEALEKEMAGEDIVHVFSLARASSFGM
HHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
NAVLYHSGYQYGGRLINNCFIAEGLENMNIWCKQL
EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEECC
>Mature Secondary Structure
MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKALPDIVAAAKEENAEKIIVYAKQHDE
CCCCCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PILAKQLFAPEGYLKGYYLGHSACVMVRYLSESRRQTDSYTEEQEIIEAIYRTAPRLRND
CHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
STPVFTMRKAETNDMYQLSMLYKKVFRTYPTPVFDPAYIEKTMNANTVYYIMLDHDRLIS
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHH
AASAEINPELGHAEITDCAVLPEYRGHSLTSFLIEALEKEMAGEDIVHVFSLARASSFGM
HHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
NAVLYHSGYQYGGRLINNCFIAEGLENMNIWCKQL
EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377