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The map label for this gene is yodA

Identifier: 16079011

GI number: 16079011

Start: 2126549

End: 2126938

Strand: Direct

Name: yodA

Synonym: BSU19530

Alternate gene names: 16079011

Gene position: 2126549-2126938 (Clockwise)

Preceding gene: 50812252

Following gene: 16079013

Centisome position: 50.44

GC content: 42.56

Gene sequence:

>390_bases
ATGCCATTATTGCGTTTTGATGTAATTGAGGGCCGTGATGAAAAATCGCTGCAATTGTTATTAGATACTGCTCACCAAGC
GATGGTTGAAGCATTTGGTGTTCCGGAAAGAGACCGTTATCAAATTGTCCATCAGCATCCCGCAAACGAGCTTATAATCC
AGGATGCGGGATTAGGGTTTCAGAGAACCAAGGATATGGTCATCATTAGCATGACAAGCAAAGCAAGAACCGAAAGCCAA
AAGGAAAAATTGTATGCTCTGCTTGCTGAAAGGCTAGAAAAAAAATGCGAAATTTCCCCTGACGACCTCATGGTATCTAT
TACTGAGAATGGTGACGCAGACTGGAGTTTCGGTCTCGGTGAGGCGCAATTTTTGAATGGAAAACTATAA

Upstream 100 bases:

>100_bases
TTAAAGTTGACTGCCAATCATTATATCTCTCCATTGTCTGGAAGCAAATGAGACAATATGAGAACAGACGGATAACAACT
TCATAAGAGGAGGAGTACAC

Downstream 100 bases:

>100_bases
GATTTCGTCTCCCCACAAAAAAAAGAAGAGAGAGCTCCAAAGAAGCTCTCTCTTTTTTCATAAATGCGGAAGTCATCAGT
ATAGAAGCATCCAGCAATAC

Product: tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGFQRTKDMVIISMTSKARTESQ
KEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLGEAQFLNGKL

Sequences:

>Translated_129_residues
MPLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGFQRTKDMVIISMTSKARTESQ
KEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLGEAQFLNGKL
>Mature_128_residues
PLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGFQRTKDMVIISMTSKARTESQK
EKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLGEAQFLNGKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOLI_BACSU (O34882)

Other databases:

- EMBL:   AF015775
- EMBL:   AF006665
- EMBL:   AL009126
- PIR:   F69902
- RefSeq:   NP_389834.1
- HSSP:   Q9EV83
- ProteinModelPortal:   O34882
- SMR:   O34882
- EnsemblBacteria:   EBBACT00000003229
- GeneID:   939461
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19530
- NMPDR:   fig|224308.1.peg.1957
- GenoList:   BSU19530
- GeneTree:   EBGT00050000002087
- HOGENOM:   HBG342678
- ProtClustDB:   CLSK887426
- BioCyc:   BSUB:BSU19530-MONOMER
- InterPro:   IPR004370
- InterPro:   IPR014347
- Gene3D:   G3DSA:3.30.429.10

Pfam domain/function: PF01361 Tautomerase

EC number: NA

Molecular weight: Translated: 14605; Mature: 14474

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: ACT_SITE 2-2

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGF
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCEEEEECCCCCC
QRTKDMVIISMTSKARTESQKEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLG
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECCCC
EAQFLNGKL
CCCCCCCCC
>Mature Secondary Structure 
PLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGF
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCEEEEECCCCCC
QRTKDMVIISMTSKARTESQKEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLG
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECCCC
EAQFLNGKL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377