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The map label for this gene is yocL

Identifier: 16078985

GI number: 16078985

Start: 2097692

End: 2098024

Strand: Reverse

Name: yocL

Synonym: BSU19250

Alternate gene names: 16078985

Gene position: 2098024-2097692 (Counterclockwise)

Preceding gene: 16078986

Following gene: 255767450

Centisome position: 49.77

GC content: 42.64

Gene sequence:

>333_bases
ATGAAAAAAATGTTCCGGTCGCTGATCAGGCATTGCTTGAAACCAGAACTTGACAAACTGCGTGAATGTGAAGAAAGACT
CTCAGTGATTGAGAAACAAAAACAAAGCAGCAAACAAGAGTCTGAAGAAACCTATATACATATTGAAACGCTGAATGTCG
AAAAAGTTGACTATCATCTTGAATTCGGCGAGCTGACCATTGATGAACTGAGCGGCAGATTAAATATAGGCGCAACCTAT
TATATACCGCCAGAAGAGAAGGACAAAAAGTGCCAACGAAAACCCGAAGCACCATCGACGCCAGCGGTCACGATCCGTTC
AAAAAGGCAGTAG

Upstream 100 bases:

>100_bases
ATATTGATGTTAGTCGGAAGCATGAAAACCTCTCCTTTCTATGGGATATACCTCATTATATATGTAGACGAAAGAGGAGT
ATGCAAAGGGTCGTGATGTC

Downstream 100 bases:

>100_bases
CTCATCTTTCCATCGATGTTTCCATGTTTGACAGAAGGCAAAACGGGAAACAGGATAGAAAGGAGAGGATATACATGGCA
CTGACAAAAGAACAAACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQESEETYIHIETLNVEKVDYHLEFGELTIDELSGRLNIGATY
YIPPEEKDKKCQRKPEAPSTPAVTIRSKRQ

Sequences:

>Translated_110_residues
MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQESEETYIHIETLNVEKVDYHLEFGELTIDELSGRLNIGATY
YIPPEEKDKKCQRKPEAPSTPAVTIRSKRQ
>Mature_110_residues
MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQESEETYIHIETLNVEKVDYHLEFGELTIDELSGRLNIGATY
YIPPEEKDKKCQRKPEAPSTPAVTIRSKRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOCL_BACSU (O34976)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   A69902
- RefSeq:   NP_389806.1
- EnsemblBacteria:   EBBACT00000000421
- GeneID:   939586
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19250
- NMPDR:   fig|224308.1.peg.1929
- GenoList:   BSU19250
- GeneTree:   EBGT00050000002967
- HOGENOM:   HBG345478
- OMA:   NIGATYY
- ProtClustDB:   CLSK887418
- BioCyc:   BSUB:BSU19250-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12963; Mature: 12963

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQESEETYIHIETLNVEKVDYHL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEE
EFGELTIDELSGRLNIGATYYIPPEEKDKKCQRKPEAPSTPAVTIRSKRQ
ECCCEEHHHCCCEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQESEETYIHIETLNVEKVDYHL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEE
EFGELTIDELSGRLNIGATYYIPPEEKDKKCQRKPEAPSTPAVTIRSKRQ
ECCCEEHHHCCCEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377