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The map label for this gene is yocK

Identifier: 255767450

GI number: 255767450

Start: 2097126

End: 2097617

Strand: Reverse

Name: yocK

Synonym: BSU19240

Alternate gene names: 255767450

Gene position: 2097617-2097126 (Counterclockwise)

Preceding gene: 16078985

Following gene: 16078983

Centisome position: 49.76

GC content: 43.5

Gene sequence:

>492_bases
ATGGCACTGACAAAAGAACAAACACAGCATCTCTATCATAAATTGCTCGATATGCAAAAAGAATTGTCTGGCGAGAAAAA
GGAAACAGAATCAATGACGGAAGAAGTGGGGGAGCTTTCCAATGGGGTTGACAACCATATGGCAGACCACGGGACGCTCG
TCACAGACCGGATGACAGACCAAACAGTGAAAGAGATTGACCGGGAGCTGTTAGAGGAGGTCAACCGTGCATTACAAAAG
ATGAAAGACGGAACTTATGGCGTGTGTGAAAAAACCGGCCAAGAGATTCCTTACGAAAGACTTGAAGCTGTTCCTTATGC
AAGAATGACAGTTGAGGCCCAAGCTGATGTGGAGGATGATCTGGAGACAGATGCTCCTTCTTATGAAAGAGAGTTTCATG
AACAGGTAAAAGACTTATCCAACAAAGAAACAATTGATCAAAAAAGCTCGCAGACGTATGAAATCTTGGATCGTGAACAA
GATTCGAAGTAA

Upstream 100 bases:

>100_bases
TCACGATCCGTTCAAAAAGGCAGTAGCTCATCTTTCCATCGATGTTTCCATGTTTGACAGAAGGCAAAACGGGAAACAGG
ATAGAAAGGAGAGGATATAC

Downstream 100 bases:

>100_bases
AAATGCCAAGCAAGTACACCGATATTAGATGTACTTGCTTTTTTTGAAAAAAAATCTCATATTCAAAATAAAGTGATTGA
CTTTACGTAAAAAAGAAAGT

Product: general stress protein

Products: NA

Alternate protein names: GSP16O

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTDQTVKEIDRELLEEVNRALQK
MKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVEDDLETDAPSYEREFHEQVKDLSNKETIDQKSSQTYEILDREQ
DSK

Sequences:

>Translated_163_residues
MALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTDQTVKEIDRELLEEVNRALQK
MKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVEDDLETDAPSYEREFHEQVKDLSNKETIDQKSSQTYEILDREQ
DSK
>Mature_162_residues
ALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTDQTVKEIDRELLEEVNRALQKM
KDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVEDDLETDAPSYEREFHEQVKDLSNKETIDQKSSQTYEILDREQD
SK

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): G16O_BACSU (P80872)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   H69901
- RefSeq:   NP_389805.2
- ProteinModelPortal:   P80872
- SMR:   P80872
- EnsemblBacteria:   EBBACT00000002072
- GeneID:   939676
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19240
- NMPDR:   fig|224308.1.peg.1928
- GenoList:   BSU19240
- GeneTree:   EBGT00050000001989
- HOGENOM:   HBG345080
- ProtClustDB:   CLSK887417
- BioCyc:   BSUB:BSU19240-MONOMER
- InterPro:   IPR000962
- InterPro:   IPR020458

Pfam domain/function: PF01258 zf-dskA_traR

EC number: NA

Molecular weight: Translated: 18831; Mature: 18700

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS01102 ZF_DKSA_1; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
QTVKEIDRELLEEVNRALQKMKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVEDD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCHHHHEECCCCCCHHH
LETDAPSYEREFHEQVKDLSNKETIDQKSSQTYEILDREQDSK
HCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCC
>Mature Secondary Structure 
ALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
QTVKEIDRELLEEVNRALQKMKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVEDD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCHHHHEECCCCCCHHH
LETDAPSYEREFHEQVKDLSNKETIDQKSSQTYEILDREQDSK
HCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659