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The map label for this gene is yobT

Identifier: 16078968

GI number: 16078968

Start: 2081753

End: 2082454

Strand: Reverse

Name: yobT

Synonym: BSU19080

Alternate gene names: 16078968

Gene position: 2082454-2081753 (Counterclockwise)

Preceding gene: 16078969

Following gene: 16078967

Centisome position: 49.4

GC content: 47.44

Gene sequence:

>702_bases
ATGAGAATTACTCAGTACCAAACGGTTTGGCAGCTGACTTTTTTTCCAGCATTGTTTCCGGTTAATTGCTATTTAGTAGA
GGAAGAAAACGAAGTCACCCTTATTGATGCCGCACTGCCAGGCAGCTATAAAGGGATTATTCAAGCTGTGAATCAGCTTG
GAAAACCGCTTCAGCATATTTTACTGACTCATGCACATGGGGACCATGTCGGATCACTGGATACATTGGCACAAACATTT
CCGCATGCAAAGGTCATGATCTCGGAACGGGATTCATTCTTGCTCCAAGGTGACACATCTTTGCGGCAAGATGAGCCGCA
GACGCCTATAAAAGGAGGTATTCCGAAACACATACAAACAAAGCCTCACCAACTGCTGACGGGCGGTGAAACAATTGGTT
CTCTGCTTGCCATTCCAACACCGGGCCATACACCGGGCAGCATGTCATTTCTTGATACAAGAAACGGCACTTTAATAGCA
GGAGATGCGTTTCAGTTGCGCGGAGGAATCGCTGTATCAGGTCAGATAAAATGGGCGTTTCCTTTTCCCGCTTTCGCCAC
ATGGAATAAGGAGGAGGCCATCAAAAGTGCACAATTGCTCGCCGATAAGGCGCCTTCCTGTCTCGCTGTCGGACATGGAA
AATTCCTGCGATCACCTTCAGAGCGGATGAGACAGGCGATCCAAAAAGCAAAGAAAGGATGA

Upstream 100 bases:

>100_bases
ATTTATGTAGCGATAAAAAAATAATAAACTCTTGAAAAACTAATGGTGTTAGTTAATAATAAAACTAACACCATTAGTTT
TTGTTAGGAGGAATAAAAAG

Downstream 100 bases:

>100_bases
TGAGCATGTCACCGAGAATAGGTTTGACCCAAAAAATGATTGTAGACGCTGCAGCAGAGATTGCCGATCAGGAAGGGGTA
AATGGTGTCTCACTTGCTGC

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHILLTHAHGDHVGSLDTLAQTF
PHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSFLDTRNGTLIA
GDAFQLRGGIAVSGQIKWAFPFPAFATWNKEEAIKSAQLLADKAPSCLAVGHGKFLRSPSERMRQAIQKAKKG

Sequences:

>Translated_233_residues
MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHILLTHAHGDHVGSLDTLAQTF
PHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSFLDTRNGTLIA
GDAFQLRGGIAVSGQIKWAFPFPAFATWNKEEAIKSAQLLADKAPSCLAVGHGKFLRSPSERMRQAIQKAKKG
>Mature_233_residues
MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHILLTHAHGDHVGSLDTLAQTF
PHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSFLDTRNGTLIA
GDAFQLRGGIAVSGQIKWAFPFPAFATWNKEEAIKSAQLLADKAPSCLAVGHGKFLRSPSERMRQAIQKAKKG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family

Homologues:

Organism=Escherichia coli, GI1787158, Length=161, Percent_Identity=34.1614906832298, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBT_BACSU (O34910)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   B69900
- RefSeq:   NP_389789.1
- HSSP:   Q8RPW7
- ProteinModelPortal:   O34910
- EnsemblBacteria:   EBBACT00000002368
- GeneID:   939645
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19080
- NMPDR:   fig|224308.1.peg.1912
- GenoList:   BSU19080
- GeneTree:   EBGT00050000000389
- HOGENOM:   HBG753931
- OMA:   FPAMATW
- ProtClustDB:   CLSK887404
- BioCyc:   BSUB:BSU19080-MONOMER
- InterPro:   IPR001279
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 25398; Mature: 25398

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHI
CCCCCHHHHHHHHHHHHEECEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHH
LLTHAHGDHVGSLDTLAQTFPHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQT
HHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
KPHQLLTGGETIGSLLAIPTPGHTPGSMSFLDTRNGTLIAGDAFQLRGGIAVSGQIKWAF
CCHHEEECCHHHHCEEEECCCCCCCCCCEEEECCCCEEEECCCEEECCCEEEECEEEEEE
PFPAFATWNKEEAIKSAQLLADKAPSCLAVGHGKFLRSPSERMRQAIQKAKKG
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHI
CCCCCHHHHHHHHHHHHEECEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHH
LLTHAHGDHVGSLDTLAQTFPHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQT
HHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
KPHQLLTGGETIGSLLAIPTPGHTPGSMSFLDTRNGTLIAGDAFQLRGGIAVSGQIKWAF
CCHHEEECCHHHHCEEEECCCCCCCCCCEEEECCCCEEEECCCEEECCCEEEECEEEEEE
PFPAFATWNKEEAIKSAQLLADKAPSCLAVGHGKFLRSPSERMRQAIQKAKKG
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377