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The map label for this gene is yobK

Identifier: 16078959

GI number: 16078959

Start: 2071286

End: 2071744

Strand: Reverse

Name: yobK

Synonym: BSU18990

Alternate gene names: 16078959

Gene position: 2071744-2071286 (Counterclockwise)

Preceding gene: 16078960

Following gene: 16078958

Centisome position: 49.14

GC content: 34.86

Gene sequence:

>459_bases
ATGATTTATTCGAAGGTTGAGAACTTTATTAATGAAAATAAACAAAATGCTATATTTACAGAAGGTGCAAGTCATGAAAA
CATTGGTCGCATTGAAGAAAACCTCCAATGCGATCTCCCCAACAGTTATAAATGGTTTTTAGAAAAATACGGTGCTGGTG
GTTTATTCGGCGTTTTGGTTTTAGGCTACAACTTTGATCATGCATCAGTTGTAAATAGAACTAATGAATATAAAGAACAC
TATGGCCTTACTGATGGACTTGTGGTTATTGAAGATGTTGATTACTTTGCTTACTGTCTAGATACAAATAAAATGAAAGA
CGGAGAATGCCCTGTAGTTGAATGGGATAGGGTAATTGGTTATCAAGATACTGTTGCAGACAGCTTTATTGAATTTTTTT
ATAATAAGATTCAGGAAGCGAAAGATGACTGGGATGAGGATGAAGACTGGGACGATTAA

Upstream 100 bases:

>100_bases
TAGAAATGATAAGGTTTTAAAAGCACAATACGAGAGCTTTAGAAAGAGATATTGGAAATGGAGAGCGAAACAATTTGAAA
ATGAGAATTGAGGTGTTTAT

Downstream 100 bases:

>100_bases
GCAAAAGTATTGCTATAGCGCAATAGAAGGCTTGAGTTGCACATCCTCAATCTAAATAAAATAAGCTCTCGCAATGAGAG
CTTATTTTATTGGATTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFDHASVVNRTNEYKEH
YGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD

Sequences:

>Translated_152_residues
MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFDHASVVNRTNEYKEH
YGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD
>Mature_152_residues
MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFDHASVVNRTNEYKEH
YGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBK_BACSU (O34596)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   B69899
- RefSeq:   NP_389780.1
- PDB:   2PRV
- PDBsum:   2PRV
- ProteinModelPortal:   O34596
- SMR:   O34596
- EnsemblBacteria:   EBBACT00000002145
- GeneID:   939629
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18990
- NMPDR:   fig|224308.1.peg.1903
- GenoList:   BSU18990
- GeneTree:   EBGT00050000002953
- HOGENOM:   HBG343311
- OMA:   GASHENI
- ProtClustDB:   CLSK2518238
- BioCyc:   BSUB:BSU18990-MONOMER
- InterPro:   IPR018958
- SMART:   SM00860

Pfam domain/function: PF09346 SMI1_KNR4

EC number: NA

Molecular weight: Translated: 17716; Mature: 17716

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLV
CCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCHHEEHHH
LGYNFDHASVVNRTNEYKEHYGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIG
HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHCC
YQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLV
CCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCHHEEHHH
LGYNFDHASVVNRTNEYKEHYGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIG
HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHCC
YQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377