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The map label for this gene is yobJ

Identifier: 16078958

GI number: 16078958

Start: 2070244

End: 2071086

Strand: Reverse

Name: yobJ

Synonym: BSU18980

Alternate gene names: 16078958

Gene position: 2071086-2070244 (Counterclockwise)

Preceding gene: 16078959

Following gene: 16078957

Centisome position: 49.13

GC content: 28.71

Gene sequence:

>843_bases
TTGGAGTTATTAGATATTTGGAATTGGATACAACAAAATGGTATTCTTACTGCAGTAATTACGGGTATAGTTGCATTGCT
ATTCAATCAAAGACAAAAAAGTATAGAACGATTCTACTCTCAATCAGGTGAAACATTAGAAAAAATTTTAGAGCCTATGT
ATTATTCCCTAAAAGAAATAAAGAATGAAGAAGATGAAAACCATAAAATGGTCCTTATAGAAAAATTTTTCGAAGAATAT
AGTGGGAAAAAGGGGAAGCTATCAAAACTTAGAAACATCTTATTGATAGATCAAATTTTGAATACAGAAGATTGTTTCAG
AGAGTATATTTTAAACAAGAACAGCGAGAATAGGAAAAAATTATTTTATAAAATGAGAATGTTAGATCAAGCAGTTAATA
AAGAATATAGAAGTATATTTGTTACTCTAAACAAGAATTATAATTGGTATAAAGTTCTTTTTAGAACGAATTATATTTTA
AGCGCTGTTTTTGTTTTTGTTAGATGGTTTAAAGAAACTCTAGCTTTTTTTGTCGGTGCTTCAGCATTTGCTTTTATACC
CCTTCTATATGATAAATATTTAGGCGAACAAGTTTTAGGAAATTGGTTAGAGGTAAATAAACTTATTTTTGGACTTTCTT
GTTCAGCTCTTTATATCTTTTGGATAATACATTATTTCCTTTTAAAAGATACAATGCAAAGGAAAGATGAAATATCTTTG
TTTCAGGAATGGTTTGATAAAACTAAGCTAGGGAAATGGACTAACAAGAATGTCTGGGGAAAGATTGGGAATTGGAATGT
TGAAAGACGAGCTAGAAGAGTAAGAAATGATGAAGATGTATAA

Upstream 100 bases:

>100_bases
TAATTAAAGTGACAGAAGTTTTCTAGTCCCGTTTTATATGAAACCTTTTTTATTTTAGCCCGTATTAAAAGTAAATTCAG
AGAGAAGGGGAGAAGCTTAA

Downstream 100 bases:

>100_bases
AGGCTTGTGCGCTATTTTAGATCATTATAACGTTACAAGAAACAATAAAAAAGCTTTCCAAGTCTCTTGAGGTTTATTGT
AATGCATTTCACGGAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MELLDIWNWIQQNGILTAVITGIVALLFNQRQKSIERFYSQSGETLEKILEPMYYSLKEIKNEEDENHKMVLIEKFFEEY
SGKKGKLSKLRNILLIDQILNTEDCFREYILNKNSENRKKLFYKMRMLDQAVNKEYRSIFVTLNKNYNWYKVLFRTNYIL
SAVFVFVRWFKETLAFFVGASAFAFIPLLYDKYLGEQVLGNWLEVNKLIFGLSCSALYIFWIIHYFLLKDTMQRKDEISL
FQEWFDKTKLGKWTNKNVWGKIGNWNVERRARRVRNDEDV

Sequences:

>Translated_280_residues
MELLDIWNWIQQNGILTAVITGIVALLFNQRQKSIERFYSQSGETLEKILEPMYYSLKEIKNEEDENHKMVLIEKFFEEY
SGKKGKLSKLRNILLIDQILNTEDCFREYILNKNSENRKKLFYKMRMLDQAVNKEYRSIFVTLNKNYNWYKVLFRTNYIL
SAVFVFVRWFKETLAFFVGASAFAFIPLLYDKYLGEQVLGNWLEVNKLIFGLSCSALYIFWIIHYFLLKDTMQRKDEISL
FQEWFDKTKLGKWTNKNVWGKIGNWNVERRARRVRNDEDV
>Mature_280_residues
MELLDIWNWIQQNGILTAVITGIVALLFNQRQKSIERFYSQSGETLEKILEPMYYSLKEIKNEEDENHKMVLIEKFFEEY
SGKKGKLSKLRNILLIDQILNTEDCFREYILNKNSENRKKLFYKMRMLDQAVNKEYRSIFVTLNKNYNWYKVLFRTNYIL
SAVFVFVRWFKETLAFFVGASAFAFIPLLYDKYLGEQVLGNWLEVNKLIFGLSCSALYIFWIIHYFLLKDTMQRKDEISL
FQEWFDKTKLGKWTNKNVWGKIGNWNVERRARRVRNDEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBJ_BACSU (O34774)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   A69899
- RefSeq:   NP_389779.1
- EnsemblBacteria:   EBBACT00000002675
- GeneID:   939633
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18980
- NMPDR:   fig|224308.1.peg.1902
- GenoList:   BSU18980
- GeneTree:   EBGT00050000006667
- OMA:   ASAFAFI
- ProtClustDB:   CLSK887397
- BioCyc:   BSUB:BSU18980-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33750; Mature: 33750

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf6c3dd8)-; HASH(0xe4f0a20)-; HASH(0xff39f4c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLDIWNWIQQNGILTAVITGIVALLFNQRQKSIERFYSQSGETLEKILEPMYYSLKEI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KNEEDENHKMVLIEKFFEEYSGKKGKLSKLRNILLIDQILNTEDCFREYILNKNSENRKK
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH
LFYKMRMLDQAVNKEYRSIFVTLNKNYNWYKVLFRTNYILSAVFVFVRWFKETLAFFVGA
HHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFAFIPLLYDKYLGEQVLGNWLEVNKLIFGLSCSALYIFWIIHYFLLKDTMQRKDEISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQEWFDKTKLGKWTNKNVWGKIGNWNVERRARRVRNDEDV
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCH
>Mature Secondary Structure
MELLDIWNWIQQNGILTAVITGIVALLFNQRQKSIERFYSQSGETLEKILEPMYYSLKEI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KNEEDENHKMVLIEKFFEEYSGKKGKLSKLRNILLIDQILNTEDCFREYILNKNSENRKK
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH
LFYKMRMLDQAVNKEYRSIFVTLNKNYNWYKVLFRTNYILSAVFVFVRWFKETLAFFVGA
HHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFAFIPLLYDKYLGEQVLGNWLEVNKLIFGLSCSALYIFWIIHYFLLKDTMQRKDEISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQEWFDKTKLGKWTNKNVWGKIGNWNVERRARRVRNDEDV
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377