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The map label for this gene is yozK

Identifier: 16078954

GI number: 16078954

Start: 2064200

End: 2064547

Strand: Reverse

Name: yozK

Synonym: BSU18940

Alternate gene names: 16078954

Gene position: 2064547-2064200 (Counterclockwise)

Preceding gene: 16078955

Following gene: 255767448

Centisome position: 48.97

GC content: 36.49

Gene sequence:

>348_bases
ATGACTGATTACTCACAATTTCCACGTGAGAATATACTCTGTGTCGATATGAAATCCTTTTATGCTTCTGTATCGGCTGT
AGCAATGGGGCTTAATCCTTTAACATGTTATCTTGCCGTTGTAGGGAATACGGATAGACAGGGAAGTGTAGTGTTAGCTG
CATCTCCTGCACTTAAAAAAGATTTTGGAATCAAAACAGGATCGAGACTATTTGAGATACCTGAAGATCCAAGAATATAC
ATTGTAAATCCACAAATGAAGCTTTTCATCAGAGTTTCAACTGAGATTACAAAGCTGTTTTACAGATTTGTTCCTGAAAA
ATGTGTCCACACGTATTCAATTGATTAA

Upstream 100 bases:

>100_bases
GTACATTACATTAATTTTGAACAACAAAAGCTTCACGTAAAAGACCAGAACGACAATACAGTTTATATCAACATGAATAA
CATCATAAGAGTTATATACA

Downstream 100 bases:

>100_bases
TCTTTTTTAGATGCAGGAAAAGAGAATCCTGAAGAAATGGCCAAAGCAATCCAAAGCAGCATGTGGAGAGAATTTGGTTT
GATGTGCACAGTTGGAATTG

Product: DNA repair protein fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTDYSQFPRENILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLFEIPEDPRIY
IVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID

Sequences:

>Translated_115_residues
MTDYSQFPRENILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLFEIPEDPRIY
IVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID
>Mature_114_residues
TDYSQFPRENILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLFEIPEDPRIYI
VNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 umuC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017962
- InterPro:   IPR017961
- InterPro:   IPR001126
- InterPro:   IPR017963 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 12978; Mature: 12847

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYSQFPRENILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKK
CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHH
DFGIKTGSRLFEIPEDPRIYIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID
HCCCCCCCEEEECCCCCEEEEECCCEEEEEEECHHHHHHHHHHCCHHHHEEECCC
>Mature Secondary Structure 
TDYSQFPRENILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKK
CCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHH
DFGIKTGSRLFEIPEDPRIYIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID
HCCCCCCCEEEECCCCCEEEEECCCEEEEEEECHHHHHHHHHHCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9722542; 9384377 [H]