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The map label for this gene is yndB

Identifier: 16078836

GI number: 16078836

Start: 1906272

End: 1906706

Strand: Reverse

Name: yndB

Synonym: BSU17730

Alternate gene names: 16078836

Gene position: 1906706-1906272 (Counterclockwise)

Preceding gene: 16078846

Following gene: 16078834

Centisome position: 45.23

GC content: 45.52

Gene sequence:

>435_bases
ATGGCTCAAAACAACGAAAATGCATTACCGGATATTACAAAAAGCATTACTCTGGAGGCTCCCATTCAGAAAGTCTGGGA
GACAGTCTCTACTTCAGAAGGCATTGCCAAGTGGTTTATGCCCAATGACTTTCAGCTCAAAGAAGGACAAGAATTTCACT
TACAATCGCCGTTTGGGCCGTCCCCTTGTAAAGTTTTGGCTGTTCAAGCTCCAACTGAACTTTCTTTTGAATGGGATACA
GAAGGATGGGTCGTTACCTTTCAATTAGAAGACTTGGGGGAAAAGACAGGGTTTACCCTTATTCACAGCGGCTGGAAAGA
GCCGAATGAAGTGATCGGCAAAGCAAACGAGAAAAGCTCCGTCGTTCGCGGTAAGATGGATGGCGGCTGGACTGGCATTG
TAAATGAACGGCTTCGTAAGGCTGTCGAAGAATAA

Upstream 100 bases:

>100_bases
AACAGCAGCTCTAGCATAAATAATGCACGCTATGGACATGATCTTATTAGTTATTATATGATTGAATTGAAAAAACATCA
TATGTCAAGAGGTAAACGAA

Downstream 100 bases:

>100_bases
AAAAGAGAGAGGTATCTCTCTTTTTTGTTTTTTTCCAAGGGTTATACTTCACAATTTGAGTCCATCAATCATAAAACGTA
ACAGTTTTAGATTTACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQEFHLQSPFGPSPCKVLAVQAPTELSFEWDT
EGWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEE

Sequences:

>Translated_144_residues
MAQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQEFHLQSPFGPSPCKVLAVQAPTELSFEWDT
EGWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEE
>Mature_143_residues
AQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQEFHLQSPFGPSPCKVLAVQAPTELSFEWDTE
GWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEE

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AHA1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNDB_BACSU (O31806)

Other databases:

- EMBL:   AL009126
- PIR:   C69889
- RefSeq:   NP_389656.1
- PDB:   2KEW
- PDB:   2KTE
- PDBsum:   2KEW
- PDBsum:   2KTE
- ProteinModelPortal:   O31806
- SMR:   O31806
- EnsemblBacteria:   EBBACT00000003393
- GeneID:   939524
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17730
- NMPDR:   fig|224308.1.peg.1777
- GenoList:   BSU17730
- GeneTree:   EBGT00050000001670
- HOGENOM:   HBG338586
- OMA:   IQKVWNV
- ProtClustDB:   CLSK873050
- BioCyc:   BSUB:BSU17730-MONOMER
- InterPro:   IPR013538

Pfam domain/function: PF08327 AHSA1

EC number: NA

Molecular weight: Translated: 16120; Mature: 15989

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQEFHLQSPFGP
CCCCCCCCCCCCHHHEEECCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCCC
SPCKVLAVQAPTELSFEWDTEGWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSS
CCEEEEEEECCCCCEEEECCCCEEEEEEEHHCCCCCCEEEEECCCCCHHHHHCCCCCCCC
VVRGKMDGGWTGIVNERLRKAVEE
EEECCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure 
AQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQEFHLQSPFGP
CCCCCCCCCCCHHHEEECCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCCC
SPCKVLAVQAPTELSFEWDTEGWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSS
CCEEEEEEECCCCCEEEECCCCEEEEEEEHHCCCCCCEEEEECCCCCHHHHHCCCCCCCC
VVRGKMDGGWTGIVNERLRKAVEE
EEECCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377