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The map label for this gene is yndM

Identifier: 16078846

GI number: 16078846

Start: 1916006

End: 1916545

Strand: Reverse

Name: yndM

Synonym: BSU17830

Alternate gene names: 16078846

Gene position: 1916545-1916006 (Counterclockwise)

Preceding gene: 16078848

Following gene: 16078836

Centisome position: 45.46

GC content: 37.59

Gene sequence:

>540_bases
ATGACCATTATGAATGGTTTTGAATTGCATTATTTATCATTTGTTTACGCCCAAGAATTTTCTTCAAAAAATAACAATTT
AGGTGGTCAAATGAAACATATCATTGCGCTTGCTTCAAAGATTGCTTTCACTCTCGCCCTTTTATATGTGATTTTGGACA
GAGTCTATCACGCATCCTTTTTAAGTGTGATGTTTATTGCACTTTTCTTAGGTTTTGTTTCCTATCTTTCTGGTGACATG
CTCGTCTTACCCAGAACAAACAATATTACAGCTTCATTGGCTGACTTTGGCCTTTCATTCGTTATTCTTTGGGTATTTGT
TTTAACCCAAACAAGAAACGATTTCTCACCATTTGGAGCGGCTCTCCTTTCCGCTGCCTGTCTTACTGTTTTTGAATACT
TTTTTCATCGGTATTTACTGAAAAATGTGCTTGATGAAAATTTCCGAAATGAACTGTCAGCGAGAGATAACACGTTGCAG
TATCAAACGGAAGCCGCGGACGAGCTGTTTCCCGAAACGAAAGAGAAGCATAAGGAATAG

Upstream 100 bases:

>100_bases
AAAGCTGATCATCCACATATACGACTTTTTTCATAAGAAAGTTTCATACAGCTGAAAAAAATACCAGTGTAAACAAAAAC
GGACTGTTTAAAATAGTAAC

Downstream 100 bases:

>100_bases
GAGGCTGTCTTATCGCCTCCTATTTTTCAGTAGCTATTTTTGAGAAAACGGAACATCACTTCTGTAAACTCATAAAACCT
CTCATTTTGAGTAACAGCTC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTIMNGFELHYLSFVYAQEFSSKNNNLGGQMKHIIALASKIAFTLALLYVILDRVYHASFLSVMFIALFLGFVSYLSGDM
LVLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGAALLSAACLTVFEYFFHRYLLKNVLDENFRNELSARDNTLQ
YQTEAADELFPETKEKHKE

Sequences:

>Translated_179_residues
MTIMNGFELHYLSFVYAQEFSSKNNNLGGQMKHIIALASKIAFTLALLYVILDRVYHASFLSVMFIALFLGFVSYLSGDM
LVLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGAALLSAACLTVFEYFFHRYLLKNVLDENFRNELSARDNTLQ
YQTEAADELFPETKEKHKE
>Mature_178_residues
TIMNGFELHYLSFVYAQEFSSKNNNLGGQMKHIIALASKIAFTLALLYVILDRVYHASFLSVMFIALFLGFVSYLSGDML
VLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGAALLSAACLTVFEYFFHRYLLKNVLDENFRNELSARDNTLQY
QTEAADELFPETKEKHKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNDM_BACSU (O31816)

Other databases:

- EMBL:   AL009126
- PIR:   D69890
- RefSeq:   NP_389666.1
- ProteinModelPortal:   O31816
- EnsemblBacteria:   EBBACT00000003147
- GeneID:   938236
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17830
- NMPDR:   fig|224308.1.peg.1787
- GenoList:   BSU17830
- GeneTree:   EBGT00050000001910
- HOGENOM:   HBG339787
- OMA:   FVATWIG
- ProtClustDB:   CLSK887349
- BioCyc:   BSUB:BSU17830-MONOMER
- InterPro:   IPR019649

Pfam domain/function: PF10710 DUF2512

EC number: NA

Molecular weight: Translated: 20453; Mature: 20322

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf705c50)-; HASH(0xb4ce2e0)-; HASH(0xc664a1c)-; HASH(0xf545f50)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIMNGFELHYLSFVYAQEFSSKNNNLGGQMKHIIALASKIAFTLALLYVILDRVYHASF
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVMFIALFLGFVSYLSGDMLVLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALLSAACLTVFEYFFHRYLLKNVLDENFRNELSARDNTLQYQTEAADELFPETKEKHKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCH
>Mature Secondary Structure 
TIMNGFELHYLSFVYAQEFSSKNNNLGGQMKHIIALASKIAFTLALLYVILDRVYHASF
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVMFIALFLGFVSYLSGDMLVLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALLSAACLTVFEYFFHRYLLKNVLDENFRNELSARDNTLQYQTEAADELFPETKEKHKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377