Click here to switch to the map view.

The map label for this gene is ymxH

Identifier: 16078735

GI number: 16078735

Start: 1743924

End: 1744181

Strand: Direct

Name: ymxH

Synonym: BSU16720

Alternate gene names: 16078735

Gene position: 1743924-1744181 (Clockwise)

Preceding gene: 255767376

Following gene: 16078736

Centisome position: 41.37

GC content: 44.19

Gene sequence:

>258_bases
ATGCGGCTCAGTGAATTATCGGGAAAGGAAATTGTAGACATCAAAAGAGCTGAACGGCTCGGAGTGCTCGGCCAGACCGA
TTTGGAAATCAATGAACAGGATGGACAGATTACAGCACTCCTCATTCCCACAGTTAAGTGGTTTGGTTTGAGAAAGCAAG
GTCATGACATTCGTGTCCCATGGCACCATATTCAAAAGATCGGTTCAGATATGATTATATTAGATGTACCTGAGGAAATG
CCTCCTCGACAAGAGTAA

Upstream 100 bases:

>100_bases
CTTCCGGCAATATGCCGTCTTAAAAAGGAAAGCCTGCCCCATAATGGAGCAGGCATTTTTTAATCCCTTTCATCATACAT
AGTACAAGGGGGTGACAGAC

Downstream 100 bases:

>100_bases
ATAGCCCAATTGACTGTGAAGCGGGCTCTAAAGAAAACATCTGAAACATCGGCTGCCGGAGCCGATGTTTTTTTATATGG
AAAAAGCGCATCTTTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGLRKQGHDIRVPWHHIQKIGSDMIILDVPEEM
PPRQE

Sequences:

>Translated_85_residues
MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGLRKQGHDIRVPWHHIQKIGSDMIILDVPEEM
PPRQE
>Mature_85_residues
MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGLRKQGHDIRVPWHHIQKIGSDMIILDVPEEM
PPRQE

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ylmC/ymxH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMXH_BACSU (Q04811)

Other databases:

- EMBL:   L08471
- EMBL:   AL009126
- PIR:   A46665
- RefSeq:   NP_389554.1
- ProteinModelPortal:   Q04811
- SMR:   Q04811
- EnsemblBacteria:   EBBACT00000003678
- GeneID:   939648
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16720
- NMPDR:   fig|224308.1.peg.1675
- GenoList:   BSU16720
- GeneTree:   EBGT00050000001948
- HOGENOM:   HBG485934
- OMA:   MILCDIT
- ProtClustDB:   CLSK887315
- BioCyc:   BSUB:BSU16720-MONOMER
- InterPro:   IPR007903
- InterPro:   IPR011033
- InterPro:   IPR014238
- TIGRFAMs:   TIGR02888

Pfam domain/function: PF05239 PRC; SSF50346 PRCH_cytoplasmic

EC number: NA

Molecular weight: Translated: 9764; Mature: 9764

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGLRKQGHDIRVP
CCCCCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEECCCCCCEEECC
WHHIQKIGSDMIILDVPEEMPPRQE
HHHHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGLRKQGHDIRVP
CCCCCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEECCCCCCEEECC
WHHIQKIGSDMIILDVPEEMPPRQE
HHHHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8098035; 9384377