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The map label for this gene is tsf

Identifier: 16078713

GI number: 16078713

Start: 1718775

End: 1719656

Strand: Direct

Name: tsf

Synonym: BSU16500

Alternate gene names: 16078713

Gene position: 1718775-1719656 (Clockwise)

Preceding gene: 16078712

Following gene: 50812227

Centisome position: 40.77

GC content: 41.27

Gene sequence:

>882_bases
ATGGCAATTACTGCACAGCAAGTAAAAGAACTGCGTGAAAAAACTGGCGCGGGCATGATGGATTGTAAAAAAGCGTTAAC
TGAAACTGACGGAGATATGGACAAAGCAATTGACCTTTTAAGAGAAAAAGGAATTGCAAAAGCAGCGAAAAAAGCTGACC
GTATCGCAGCAGAAGGTTCTACTCTTATTAAAACTGACGGCAACAAAGGCGTTATCCTAGAAGTAAACTCTGAAACTGAT
TTCGTTGCGAAAAACGAAGGTTTTAAAGAGCTTCTTAACACTTTAGCTGACCACCTTCTTGCAAACACGCCAGCTGATGT
TGAAGAAGCAATGGGCCAAAAAATGGAAAATGGCTCAACTGTTGAAGAGTACATCACAAGCGCAGTTGCTAAAATCGGTG
AGAAAATCACTCTTCGCCGCTTTACAGTTCTTACAAAAGACGACAGCTCTGCATTCGGTGCGTACCTTCACATGGGCGGC
CGCATCGGTGTATTAACTGTTCTCAACGGTACAACTGATGAAGAAACTGCGAAAGATATCGCAATGCACGTTGCTGCAGT
TAACCCTCGTTACATTTCTCGTGATCAAGTATCTGAAGAAGAAACAAATCATGAGCGTCAAATCTTAACTCAGCAAGCCC
TCCAAGAAGGCAAACCTGAAAACATCGTAGCGAAAATGGTTGAAGGCCGTCTGAACAAATTCTTCGAAGAAATTTGTCTA
TTAGACCAAGCGTTCGTTAAAAACCCAGATGAAAAAGTGAAACAAGTTATTGCAGCGAAAAACGCTACTGTTCAAACTTT
TGTCCGCTATGAAGTTGGAGAAGGCATCGAAAAACGTCAAGAAAACTTTGCTGAAGAAGTAATGAACCAAGTGAAAAAAT
AA

Upstream 100 bases:

>100_bases
CTATTCAAAAGGTGATAAGAGGGACTGCCTTTTATCACCTTTTTTCAAGAAAAATGTGTAATATACATACTCTTGTTTAA
ACATATAAGGAGGAATACAA

Downstream 100 bases:

>100_bases
TGGTGAAAAGATTTCGCGGCTAAGTCGCGTCTTTTCAGGCAGTATAGGGGACACATTTTGTGTTCCCTATTTTTAAAACT
ATATTTACAAACCTTTTTTT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAITAQQVKELREKTGAGMMDCKKALTETDGDMDKAIDLLREKGIAKAAKKADRIAAEGSTLIKTDGNKGVILEVNSETD
FVAKNEGFKELLNTLADHLLANTPADVEEAMGQKMENGSTVEEYITSAVAKIGEKITLRRFTVLTKDDSSAFGAYLHMGG
RIGVLTVLNGTTDEETAKDIAMHVAAVNPRYISRDQVSEEETNHERQILTQQALQEGKPENIVAKMVEGRLNKFFEEICL
LDQAFVKNPDEKVKQVIAAKNATVQTFVRYEVGEGIEKRQENFAEEVMNQVKK

Sequences:

>Translated_293_residues
MAITAQQVKELREKTGAGMMDCKKALTETDGDMDKAIDLLREKGIAKAAKKADRIAAEGSTLIKTDGNKGVILEVNSETD
FVAKNEGFKELLNTLADHLLANTPADVEEAMGQKMENGSTVEEYITSAVAKIGEKITLRRFTVLTKDDSSAFGAYLHMGG
RIGVLTVLNGTTDEETAKDIAMHVAAVNPRYISRDQVSEEETNHERQILTQQALQEGKPENIVAKMVEGRLNKFFEEICL
LDQAFVKNPDEKVKQVIAAKNATVQTFVRYEVGEGIEKRQENFAEEVMNQVKK
>Mature_292_residues
AITAQQVKELREKTGAGMMDCKKALTETDGDMDKAIDLLREKGIAKAAKKADRIAAEGSTLIKTDGNKGVILEVNSETDF
VAKNEGFKELLNTLADHLLANTPADVEEAMGQKMENGSTVEEYITSAVAKIGEKITLRRFTVLTKDDSSAFGAYLHMGGR
IGVLTVLNGTTDEETAKDIAMHVAAVNPRYISRDQVSEEETNHERQILTQQALQEGKPENIVAKMVEGRLNKFFEEICLL
DQAFVKNPDEKVKQVIAAKNATVQTFVRYEVGEGIEKRQENFAEEVMNQVKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=295, Percent_Identity=24.406779661017, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=49.8245614035088, Blast_Score=246, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17561440, Length=305, Percent_Identity=28.8524590163934, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI19921466, Length=306, Percent_Identity=24.8366013071895, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 32354; Mature: 32223

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITAQQVKELREKTGAGMMDCKKALTETDGDMDKAIDLLREKGIAKAAKKADRIAAEGS
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TLIKTDGNKGVILEVNSETDFVAKNEGFKELLNTLADHLLANTPADVEEAMGQKMENGST
EEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
VEEYITSAVAKIGEKITLRRFTVLTKDDSSAFGAYLHMGGRIGVLTVLNGTTDEETAKDI
HHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AMHVAAVNPRYISRDQVSEEETNHERQILTQQALQEGKPENIVAKMVEGRLNKFFEEICL
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQAFVKNPDEKVKQVIAAKNATVQTFVRYEVGEGIEKRQENFAEEVMNQVKK
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITAQQVKELREKTGAGMMDCKKALTETDGDMDKAIDLLREKGIAKAAKKADRIAAEGS
CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TLIKTDGNKGVILEVNSETDFVAKNEGFKELLNTLADHLLANTPADVEEAMGQKMENGST
EEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
VEEYITSAVAKIGEKITLRRFTVLTKDDSSAFGAYLHMGGRIGVLTVLNGTTDEETAKDI
HHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AMHVAAVNPRYISRDQVSEEETNHERQILTQQALQEGKPENIVAKMVEGRLNKFFEEICL
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQAFVKNPDEKVKQVIAAKNATVQTFVRYEVGEGIEKRQENFAEEVMNQVKK
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA