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The map label for this gene is ylaD

Identifier: 16078538

GI number: 16078538

Start: 1544603

End: 1544896

Strand: Direct

Name: ylaD

Synonym: BSU14740

Alternate gene names: 16078538

Gene position: 1544603-1544896 (Clockwise)

Preceding gene: 16078537

Following gene: 16078541

Centisome position: 36.64

GC content: 44.56

Gene sequence:

>294_bases
ATGACCTGCTTTCTAGTAAGAGACCTGCTTCCTCTGTATCTTGAAGGTGATTGTAAAAGAGAAACGGAACACGTTATAGA
AGAGCATTTAAAAATGTGCAGCAGCTGCAGAGACATGTATGACACGATGGCTGAGCCATTTGAATTGGAAAGCGAACAGG
CCGTTGAGGAGGCTTATCTGCCGGAAGAAGAACTGCGTTTTAAACAGAGGTACTATGGATTACTGATCATGAAAGCTGCC
TGCTGGTTTGGAGCGGCGGTTGCCATGATGCTGATCATCAAACTGCTGATATAA

Upstream 100 bases:

>100_bases
AGATATTAGGATGGAGTCTTTCTAAGGTGAATACCACATTGCACCGGGCTAGATTAGAGCTAAAGAAAAACATGACGAAA
AGTAGAGAGGAGGAGCGGAT

Downstream 100 bases:

>100_bases
AAAAAGCGCTTGTCCGATTCCGGCAAGCGCTTTTTTACATTAAGCCTGGGGATGAATCATATCGTAAATAGCGGCAAGCT
GTTCTTGTGACAGGGCACTG

Product: anti-YlaC sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTCFLVRDLLPLYLEGDCKRETEHVIEEHLKMCSSCRDMYDTMAEPFELESEQAVEEAYLPEEELRFKQRYYGLLIMKAA
CWFGAAVAMMLIIKLLI

Sequences:

>Translated_97_residues
MTCFLVRDLLPLYLEGDCKRETEHVIEEHLKMCSSCRDMYDTMAEPFELESEQAVEEAYLPEEELRFKQRYYGLLIMKAA
CWFGAAVAMMLIIKLLI
>Mature_96_residues
TCFLVRDLLPLYLEGDCKRETEHVIEEHLKMCSSCRDMYDTMAEPFELESEQAVEEAYLPEEELRFKQRYYGLLIMKAAC
WFGAAVAMMLIIKLLI

Specific function: Anti-sigma factor for ylaC

COG id: COG5660

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLAD_BACSU (O07628)

Other databases:

- EMBL:   Z97025
- EMBL:   AL009126
- PIR:   B69872
- RefSeq:   NP_389357.1
- ProteinModelPortal:   O07628
- SMR:   O07628
- EnsemblBacteria:   EBBACT00000002621
- GeneID:   935961
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14740
- NMPDR:   fig|224308.1.peg.1476
- GenoList:   BSU14740
- GeneTree:   EBGT00050000002214
- HOGENOM:   HBG337986
- OMA:   LYIEGDC
- ProtClustDB:   CLSK887254
- BioCyc:   BSUB:BSU14740-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11406; Mature: 11274

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xea2de48)-;

Cys/Met content:

5.2 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
12.4 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCFLVRDLLPLYLEGDCKRETEHVIEEHLKMCSSCRDMYDTMAEPFELESEQAVEEAYL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
PEEELRFKQRYYGLLIMKAACWFGAAVAMMLIIKLLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure 
TCFLVRDLLPLYLEGDCKRETEHVIEEHLKMCSSCRDMYDTMAEPFELESEQAVEEAYL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
PEEELRFKQRYYGLLIMKAACWFGAAVAMMLIIKLLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377