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The map label for this gene is rok

Identifier: 16078488

GI number: 16078488

Start: 1493787

End: 1494362

Strand: Direct

Name: rok

Synonym: BSU14240

Alternate gene names: 16078488

Gene position: 1493787-1494362 (Clockwise)

Preceding gene: 255767334

Following gene: 16078490

Centisome position: 35.43

GC content: 42.36

Gene sequence:

>576_bases
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Upstream 100 bases:

>100_bases
AATATAATAGTAAAATGCTAAAATAATAGTTGATAAAATTACTTTTGTAATCTAATATCTTAATTAAAGATGTTAATTTT
GATAGGGGGTACATTGAGGA

Downstream 100 bases:

>100_bases
ATATAAAGAAAAACTGCTTGGCATCGCTCAAGCAGTTTTTTTATTGAGGTTTTTTCTGTGAAGGTTTGTTTTCTTTTTCA
AGATTAAGCTTATACACCCA

Product: repressor of comK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Sequences:

>Translated_191_residues
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE
>Mature_191_residues
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Specific function: Repressor of comK. Represses a number of genes that specify membrane-localized and secreted proteins, including some that encode products with antibiotic activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ROK_BACSU (O34857)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- PIR:   D69867
- RefSeq:   NP_389307.1
- ProteinModelPortal:   O34857
- EnsemblBacteria:   EBBACT00000002417
- GeneID:   938793
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14240
- NMPDR:   fig|224308.1.peg.1426
- GenoList:   BSU14240
- GeneTree:   EBGT00050000002711
- HOGENOM:   HBG337964
- OMA:   VIREYQI
- ProtClustDB:   CLSK887224
- BioCyc:   BSUB:BSU14240-MONOMER
- GO:   GO:0006350

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21840; Mature: 21840

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
SLPVLAELAAQEIRSYQPQSQQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHH
REAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEC
GEIESAESANE
CCCCCCCCCCC
>Mature Secondary Structure
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
SLPVLAELAAQEIRSYQPQSQQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHH
REAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEC
GEIESAESANE
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377