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The map label for this gene is ykuS

Identifier: 16078484

GI number: 16078484

Start: 1490939

End: 1491184

Strand: Direct

Name: ykuS

Synonym: BSU14200

Alternate gene names: 16078484

Gene position: 1490939-1491184 (Clockwise)

Preceding gene: 16078483

Following gene: 16078486

Centisome position: 35.37

GC content: 41.06

Gene sequence:

>246_bases
ATGGCTAAAAAAATTGGAATTGAACAATCGTTATCAGATGTAGAAGCTGCTTTAAAAGAAAAAGGATATGACGTTGTAAT
GATGAAAAGCCCTGCTGATGCTCAAGGCTGTGACTGCTGTGTCGTAACAGGTCTTGATAATAATGTGCAAGGGATAGCCG
ATACGGTAACACAAGCACCTGTCATTACAGCTTCCGGGATGACGGCTGAAGAAATTTGTAGCGAAGTTGAGAGCAGAATT
CAGTAA

Upstream 100 bases:

>100_bases
CATGTCATGACAGGTTATTTTTCTGTTTATGCCAATTAAGTACAAATGAAAGAATAAAATTCCATAAAATGAGCACTCTA
GTAAACGGAGGTGTTCAAAA

Downstream 100 bases:

>100_bases
TAAAAAAACCGAAGCAAAAAGCTTCGGTTCTTTTATTTATTCTGTTTCTTTAGGGAAAGCGCGGTCGAACGCGTTCTTTA
TTTCTTTTCTCAACACTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQGIADTVTQAPVITASGMTAEEICSEVESRI
Q

Sequences:

>Translated_81_residues
MAKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQGIADTVTQAPVITASGMTAEEICSEVESRI
Q
>Mature_80_residues
AKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQGIADTVTQAPVITASGMTAEEICSEVESRIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0180 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKUS_BACSU (O34783)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- PIR:   H69866
- RefSeq:   NP_389303.1
- EnsemblBacteria:   EBBACT00000003174
- GeneID:   938799
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14200
- NMPDR:   fig|224308.1.peg.1422
- GenoList:   BSU14200
- GeneTree:   EBGT00050000002263
- HOGENOM:   HBG424525
- OMA:   MGIADTS
- ProtClustDB:   PRK03094
- BioCyc:   BSUB:BSU14200-MONOMER
- HAMAP:   MF_00506
- InterPro:   IPR005370
- ProDom:   PD059670

Pfam domain/function: PF03698 UPF0180

EC number: NA

Molecular weight: Translated: 8494; Mature: 8363

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQGIADTVTQAP
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCC
VITASGMTAEEICSEVESRIQ
EEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQGIADTVTQAP
CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCC
VITASGMTAEEICSEVESRIQ
EEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377