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The map label for this gene is ykvU

Identifier: 16078447

GI number: 16078447

Start: 1449250

End: 1450587

Strand: Direct

Name: ykvU

Synonym: BSU13830

Alternate gene names: 16078447

Gene position: 1449250-1450587 (Clockwise)

Preceding gene: 16078446

Following gene: 16078448

Centisome position: 34.38

GC content: 44.77

Gene sequence:

>1338_bases
ATGAATCGATTTGTGAAAGGGATCATTCTTTTATCCATTGCCGCCTTTTTCGCTGAATGCCTTGAATTTGTCGTCAATAT
GATTTTGGCGCGGGAGCTTGGCGAGCATGGGATGGGGCTTTACATGAGTATTTTGCCCACGATCTTTTTAATTATTGTCA
TCGCGAGCCTGGAACTGCCGATATCCATTTCTAAATTCATTGCCGAGTCAAATCCTAAGCTTCATGAAAGCATGCTGAGG
CACGCTTTCAGAATGACAGCCATTTTTACTGCTTTTTCTACTGCCGCCGCTAGTATTGCGCTTCCGTTTATTCCGGTATT
TGATACATACCACCCGTTTATTAAAGGGATTGTCATCGGCTTAATTCCTGTTGTCGCCTTTACTTCAATCGCCAGGGGCT
ACTTTATGGGTGTGCAGAAAATGGGGAAGATCGCAATTGCCAATGTGCTGAAAAAAATCATCCAGCTCTTGTGCTTATTC
CTCTTTTTTCAATGGTACTCATTTGAATTGGACATGGCTGTGCTGATTTCCTTGTTTGTTCTAGTCGTGAGTGATGTGGT
CGTGCTTGTTTATTTATATTCACAATTTATCATGGCAAGGCGGGCGTTATCCGGCCAGCAGCACATTCATTTGCGCGGAA
AGGATGTAAGGAAAAGACTGCTTGCTGTTTCAATTCCTACAACAGGACTGCGTATTTTTCATGCGGTTGTCAATGCAATT
GAACCCTTTTTAGTAAAAGGAGCTCTTTTGGCTGCGGGCGTTGCCGGGACAGCGGCGATCGATCAATACGGAATGCTGGC
AGGAGTGGCTGTGACGATAGGGTCGTTCCCTGCTTTTATTGCCCATTCGTTAATGGTCGTCATGATACCGAGTATTTCGG
AAGCTTATGCACTTTCTCAGTATGACATCGTGTTAAAAAGGCTGAAGCAGTCGATTTTCATTACATTAGGTTACGGTATA
CCTGCCGTCTGGGTCATGTTCCAGTTTGCGGGACCTCTCACGCATTTGTTTTTTCACTCTCCTGAAGCGCAGTATTACTT
GCAGCTGTTGTGGCCTTACTTTCTCTTTCATCTGTTTGTCATGCCGCTGCAGGCGTGCTTAATCGGGATGGGTTTTGTGA
AAGAGGCTTTTTATCACAATGTATGGAGCCATATCGTTGCGCTAAGTATGATGTATGTACTGGGATCAATGGAGAATCTG
CAAATGCTCGGGATTATCCTTGGAATGAACACTGGCATGATTCTTTTGACGAGCCTGCACTATGCCACGATCTGCAAAGC
ATTGAAGGTATCTGTATTTCTTACGGGAGGGACCAGAACGCCGCGAATTGAAGGATGA

Upstream 100 bases:

>100_bases
TGTCTCAGCTGTGCTTTTTTTCATATAAAGAGTAAAAATAAAATAATTTTTGAACTTGTCTCATATGATGTTGGTAGTAC
AAGAGACAAGGAGAGACATC

Downstream 100 bases:

>100_bases
TAAAGGAACAGCAGGGGCAAGCTAATTGAAAAGCATGAAAGGAAGATTCCATGTTGACGAAGCGCTTGCTTACTATATAC
ATTATGTTATTAGGGTTGAT

Product: spore membrane protein involved in germination

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELPISISKFIAESNPKLHESMLR
HAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLF
LFFQWYSFELDMAVLISLFVLVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAI
EPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQYDIVLKRLKQSIFITLGYGI
PAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFVMPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENL
QMLGIILGMNTGMILLTSLHYATICKALKVSVFLTGGTRTPRIEG

Sequences:

>Translated_445_residues
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELPISISKFIAESNPKLHESMLR
HAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLF
LFFQWYSFELDMAVLISLFVLVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAI
EPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQYDIVLKRLKQSIFITLGYGI
PAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFVMPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENL
QMLGIILGMNTGMILLTSLHYATICKALKVSVFLTGGTRTPRIEG
>Mature_445_residues
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELPISISKFIAESNPKLHESMLR
HAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLF
LFFQWYSFELDMAVLISLFVLVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAI
EPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQYDIVLKRLKQSIFITLGYGI
PAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFVMPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENL
QMLGIILGMNTGMILLTSLHYATICKALKVSVFLTGGTRTPRIEG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Forespore membrane; Multi-pass membrane protein (Potential). Note=Integral membrane protein. Shortly after the initiation of the engulfment, is localized to the sporulation septum. During later stages of sporulation, remains associated with the outer fore

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKVU_BACSU (O31686)

Other databases:

- EMBL:   AL009126
- PIR:   D69869
- RefSeq:   NP_389266.1
- ProteinModelPortal:   O31686
- EnsemblBacteria:   EBBACT00000000379
- GeneID:   939262
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13830
- NMPDR:   fig|224308.1.peg.1385
- GenoList:   BSU13830
- GeneTree:   EBGT00070000031814
- HOGENOM:   HBG337957
- OMA:   ARGYFMG
- ProtClustDB:   CLSK872835
- BioCyc:   BSUB:BSU13830-MONOMER
- InterPro:   IPR002797

Pfam domain/function: PF01943 Polysacc_synt

EC number: NA

Molecular weight: Translated: 49399; Mature: 49399

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xeb7cd98)-; HASH(0xb744ae8)-; HASH(0xe48db74)-; HASH(0xe31b33c)-; HASH(0xe9a5658)-; HASH(0xe28a4d8)-; HASH(0xe1ea7b0)-; HASH(0xebf36cc)-; HASH(0xec28170)-; HASH(0xe682ed4)-; HASH(0xe28c030)-; HASH(0xe548d58)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
ISISKFIAESNPKLHESMLRHAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLFLFFQWYSFELDMAVLISLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHH
YDIVLKRLKQSIFITLGYGIPAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFV
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENLQMLGIILGMNTGMILLTSLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
YATICKALKVSVFLTGGTRTPRIEG
HHHHHHHHHHEEEEECCCCCCCCCH
>Mature Secondary Structure
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
ISISKFIAESNPKLHESMLRHAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLFLFFQWYSFELDMAVLISLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHH
YDIVLKRLKQSIFITLGYGIPAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFV
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENLQMLGIILGMNTGMILLTSLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
YATICKALKVSVFLTGGTRTPRIEG
HHHHHHHHHHEEEEECCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922