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The map label for this gene is ykvT

Identifier: 16078446

GI number: 16078446

Start: 1448506

End: 1449132

Strand: Direct

Name: ykvT

Synonym: BSU13820

Alternate gene names: 16078446

Gene position: 1448506-1449132 (Clockwise)

Preceding gene: 255767320

Following gene: 16078447

Centisome position: 34.36

GC content: 39.87

Gene sequence:

>627_bases
ATGACAACGAAATTCACTGCTCTGGCTGTTTTTCTTCTTTGTTTCATGCCTGCAGCCAAAATTGAGCATACACAAGCTTC
ACTACTGAGCGCAAAGAAGACAAAACATGAAGAAGCGAAATGGCTTACACATATAGATCGAAATACGAATGAATCTTTCC
CTTCACTGTCTGCTGATAAAGACAAGAAAATAAAACCGATTAAGCTATCAGCACACACTGAAAAGAAAGAGAAAGATAAA
CCGGACAAAACAAATGATGAGAAAGAAACATATACACAGTCTGAAAAAGAGTTGCTGTCCCGTCTCGTTCACGCAGAGGC
CAAAGGAGAATCATATAAAGGCAAGGTCGCTGTAGCAAGCGTTGTACTGAACAGGACGGAGAAAAAAGGTTTTCCTGATA
CGATAAGAGGAGTTATTTATCAGAAAAACGCCTTTGAACCGGTCGCAAACGGGAGCATTAACCAAAAGCCTGATAAAGAA
TCGATTGAAGCTGCCGAAGAAGCGCTGTCCTCAAAAAATAGAGAAACAGATGCCATATTCTTTTATAATCCGAAAACAGC
GTCAGATAATTGGATTCGTTCAAGAAAAATCGTAGAAAAAATCGGCAGACACGTTTTTGCCGTCTAA

Upstream 100 bases:

>100_bases
ACCTCCTTGGGAGAGTTGGAAAATCTTTTTCCGTGAAAATGAATGGATCTCTTGTTAAGGTTATGAAGTGTTTTTTGGAG
CACTTTAAGGAGGAAACTGT

Downstream 100 bases:

>100_bases
GCATAGAAGAGACAATTTGTCTCAGCTGTGCTTTTTTTCATATAAAGAGTAAAAATAAAATAATTTTTGAACTTGTCTCA
TATGATGTTGGTAGTACAAG

Product: cell wall hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADKDKKIKPIKLSAHTEKKEKDK
PDKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVASVVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKE
SIEAAEEALSSKNRETDAIFFYNPKTASDNWIRSRKIVEKIGRHVFAV

Sequences:

>Translated_208_residues
MTTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADKDKKIKPIKLSAHTEKKEKDK
PDKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVASVVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKE
SIEAAEEALSSKNRETDAIFFYNPKTASDNWIRSRKIVEKIGRHVFAV
>Mature_207_residues
TTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADKDKKIKPIKLSAHTEKKEKDKP
DKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVASVVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKES
IEAAEEALSSKNRETDAIFFYNPKTASDNWIRSRKIVEKIGRHVFAV

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKVT_BACSU (O31685)

Other databases:

- EMBL:   AL009126
- PIR:   C69869
- RefSeq:   NP_389265.1
- ProteinModelPortal:   O31685
- EnsemblBacteria:   EBBACT00000002741
- GeneID:   939264
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13820
- NMPDR:   fig|224308.1.peg.1384
- GenoList:   BSU13820
- GeneTree:   EBGT00050000000251
- HOGENOM:   HBG498645
- OMA:   NGSINQK
- ProtClustDB:   CLSK887203
- BioCyc:   BSUB:BSU13820-MONOMER
- InterPro:   IPR011105

Pfam domain/function: PF07486 Hydrolase_2

EC number: 3.5.1.28

Molecular weight: Translated: 23479; Mature: 23348

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKKIKPIKLSAHTEKKEKDKPDKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVAS
CCCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKESIEAAEEALSSKNRETDAIF
HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
FYNPKTASDNWIRSRKIVEKIGRHVFAV
EECCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADK
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKKIKPIKLSAHTEKKEKDKPDKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVAS
CCCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKESIEAAEEALSSKNRETDAIF
HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
FYNPKTASDNWIRSRKIVEKIGRHVFAV
EECCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377