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The map label for this gene is ykvQ

Identifier: 16078443

GI number: 16078443

Start: 1445638

End: 1446336

Strand: Direct

Name: ykvQ

Synonym: BSU13790

Alternate gene names: 16078443

Gene position: 1445638-1446336 (Clockwise)

Preceding gene: 255767317

Following gene: 255767318

Centisome position: 34.29

GC content: 37.91

Gene sequence:

>699_bases
ATGTTTCAAATGAGCTATTACTATTCTGGATTAGGATGGGACTTTATTCAACACGTTGATCAAACGAACGGAGTATTAAA
TGTTGTGTCTCCTGATTTTTTCTATATCAGAAAAGATGGATCATTACTTCTCCGTTCAGCTAATCCCGATGTGATTAAAG
CTCTTCATAGAAGAAAATTAAAAGTAGTTCCTTTTCTAAGCAATCATTGGGATCAGGATTTGGGACGATTTGCATTAATG
AACCGAGTTCTTTTAGCTAAACAAATTTCTCATGCAATAGAAGAACTGGATTTGGATGGAGTTAATATCGATATAGAAAA
CCTTACAGAAAAAGATCGGAATCTATTTACAGATTTTATTAGATTAGTAAGGAAAAGTATTCCTAGACATAAAGAAGTAT
CAGTTGCAGTGGCGGCAAATCCTTTTGGCTGGACGAAGGGCTGGCACGGATCATATGATTACGAGTATTTAGCTAAATAT
GCAGATTATCTTATGGTTATGGCCTATGATGAAAGCCGCCTTGCTGGGCCTACTGCAAGTGTAGGATGGGTGGAAAAGTC
CATTCAATATGTTCTGACCCAAAAAATCTCTCCTCAAAAACTAGTTTTAGGATTGCCATTCTATGGCCGCTGCTGGATGG
AAGGCCAATCTGCCTCTCAAGCCATTCCCCTTTACCTTGTTGTTAGTAAAAAGGCATAG

Upstream 100 bases:

>100_bases
ATAATCTTTGAGGTTTCGGAAGCGAATCAAATTGAAATGACAATCCTCATTTTTTTATTTGTGGGGAACTTGATATTTTT
GGGGATGAAGGGGTTATGAG

Downstream 100 bases:

>100_bases
CGGGACAATTATTTTTGACACCAAGAGTCAATCTCCAAAAGCTATTTTTACTGTCAATCACGATAAAAAGGGGCCGTTGC
CTTCGGGAACATATACATTA

Product: sporulation-specific glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKLKVVPFLSNHWDQDLGRFALM
NRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFIRLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKY
ADYLMVMAYDESRLAGPTASVGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA

Sequences:

>Translated_232_residues
MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKLKVVPFLSNHWDQDLGRFALM
NRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFIRLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKY
ADYLMVMAYDESRLAGPTASVGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA
>Mature_232_residues
MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKLKVVPFLSNHWDQDLGRFALM
NRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFIRLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKY
ADYLMVMAYDESRLAGPTASVGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKVQ_BACSU (O31682)

Other databases:

- EMBL:   AL009126
- PIR:   H69868
- RefSeq:   NP_389262.1
- ProteinModelPortal:   O31682
- SMR:   O31682
- EnsemblBacteria:   EBBACT00000001786
- GeneID:   939273
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13790
- NMPDR:   fig|224308.1.peg.1381
- GenoList:   BSU13790
- GeneTree:   EBGT00050000000551
- OMA:   QISHAIE
- BioCyc:   BSUB:BSU13790-MONOMER
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- Gene3D:   G3DSA:3.20.20.80

Pfam domain/function: PF00704 Glyco_hydro_18; SSF51445 Glyco_hydro_cat

EC number: NA

Molecular weight: Translated: 26615; Mature: 26615

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS01095 CHITINASE_18

Important sites: ACT_SITE 106-106

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKL
CEEEEEEECCCCHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHCCE
KVVPFLSNHWDQDLGRFALMNRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
RLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKYADYLMVMAYDESRLAGPTAS
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCH
VGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKL
CEEEEEEECCCCHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHCCE
KVVPFLSNHWDQDLGRFALMNRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
RLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKYADYLMVMAYDESRLAGPTAS
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCH
VGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377