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The map label for this gene is ykzR

Identifier: 255767318

GI number: 255767318

Start: 1446317

End: 1446568

Strand: Direct

Name: ykzR

Synonym: BSU13799

Alternate gene names: 255767318

Gene position: 1446317-1446568 (Clockwise)

Preceding gene: 16078443

Following gene: 16078444

Centisome position: 34.31

GC content: 36.51

Gene sequence:

>252_bases
TTGTTAGTAAAAAGGCATAGCGGGACAATTATTTTTGACACCAAGAGTCAATCTCCAAAAGCTATTTTTACTGTCAATCA
CGATAAAAAGGGGCCGTTGCCTTCGGGAACATATACATTATGGTTTGAAAATGAACAGTCACTCAGAGCAAAAATAAAAC
TCGCTCAAAAATATAATCTGAAAGGTCTTGGCAGCTGGAGTCTTGGACAAGAAGATGCGTCAGTCTGGAATACAGTGTTT
AAAAATATATAA

Upstream 100 bases:

>100_bases
CAAAAAATCTCTCCTCAAAAACTAGTTTTAGGATTGCCATTCTATGGCCGCTGCTGGATGGAAGGCCAATCTGCCTCTCA
AGCCATTCCCCTTTACCTTG

Downstream 100 bases:

>100_bases
TGATTTATAGTTCAGAACAAAATTCGAAGATAATTGCAATGAATCTCTAAATGGACATACTGAAAGGAGTTTATTACGAG
TGCGGGTAAAACAGTGAGGG

Product: spore-specific glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLVKRHSGTIIFDTKSQSPKAIFTVNHDKKGPLPSGTYTLWFENEQSLRAKIKLAQKYNLKGLGSWSLGQEDASVWNTVF
KNI

Sequences:

>Translated_83_residues
MLVKRHSGTIIFDTKSQSPKAIFTVNHDKKGPLPSGTYTLWFENEQSLRAKIKLAQKYNLKGLGSWSLGQEDASVWNTVF
KNI
>Mature_83_residues
MLVKRHSGTIIFDTKSQSPKAIFTVNHDKKGPLPSGTYTLWFENEQSLRAKIKLAQKYNLKGLGSWSLGQEDASVWNTVF
KNI

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKZR_BACSU (C0H404)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097720.1
- ProteinModelPortal:   C0H404
- SMR:   C0H404
- EnsemblBacteria:   EBBACT00000082690
- GeneID:   8303134
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13799
- GenoList:   BSU13799
- BioCyc:   BSUB:BSU13799-MONOMER
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- Gene3D:   G3DSA:3.20.20.80

Pfam domain/function: PF00704 Glyco_hydro_18; SSF51445 Glyco_hydro_cat

EC number: NA

Molecular weight: Translated: 9396; Mature: 9396

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKRHSGTIIFDTKSQSPKAIFTVNHDKKGPLPSGTYTLWFENEQSLRAKIKLAQKYNL
CEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCC
KGLGSWSLGQEDASVWNTVFKNI
CCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLVKRHSGTIIFDTKSQSPKAIFTVNHDKKGPLPSGTYTLWFENEQSLRAKIKLAQKYNL
CEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCC
KGLGSWSLGQEDASVWNTVFKNI
CCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377