Click here to switch to the map view.

The map label for this gene is ykrK

Identifier: 16078412

GI number: 16078412

Start: 1414125

End: 1414826

Strand: Reverse

Name: ykrK

Synonym: BSU13480

Alternate gene names: 16078412

Gene position: 1414826-1414125 (Counterclockwise)

Preceding gene: 16078416

Following gene: 16078411

Centisome position: 33.56

GC content: 41.03

Gene sequence:

>702_bases
ATGAACATTTTTAAACTCTCTCGAACCGATATGGTGCGGCTGCTCTATTCCCTAAAAGGACAAGGAGAACATAGCCCGCT
CGACATTCTCGTCCAATCAGCGAACATGTCAGCAGAAAAAGCAGCCAATCATCTAGAAATTCCTGAATTTCTTACAAGAT
ACGAACGAAAAAAACAGAAAAAAGAATACGGTCTGTCTACAAATGAAATCGTAGAGCTTGGCAACTTATGCGAGCTGACT
TCGTTAAAGTCAACCGCGATTCAAAACTGGGTAAAGCGTGATATCAAAGATCTGATCGGACACCCTGAGCTGGGCAAAAA
ATACTCAATTGAACAGGCAGTTATTCTTTTAATTGTACGTGATTTAAAATCCATTTATGACTTTGAACACATACGGGCTA
TTTTAAAAGTGGCCTTTAACACAATCTCAGACAGATCTGATGATGTCATCAGCCCGATTGCTTATTATGAAAGCTGCGCA
TATGTGCTTGATGCCATCCATCACCAAGATACTCCTTCTATGAAAGAATCAAATCTGCAGGAGATCGCCGAACAGGAGAC
AGAGCGTCTCCGTCACCGTTTTGAAGAACTGAATGACAGCCAATGGCTTAAAATCAGACAGATTATCGCCATTACAGTCC
TCTCCATTTTGACATTCCATATTCAGGCAACCGCACATAAAATGACAGCAGACATTCTATAG

Upstream 100 bases:

>100_bases
AAGGAATTCGACGTATGATGTTAATGTAATTTGCTGACGCTTGAATTTTGAACTTATACATAGACCTATATCCGCGTCAA
ATTGTTTAAAGAGGTGAACA

Downstream 100 bases:

>100_bases
TCTGCGCCACCCCGGCTCAGAGGCCGGGGTTTTATTTTTCTCCACAACAATTGCCAGCATAAATAAACCCCGTATATTTC
AAACTAAATACGCGTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEFLTRYERKKQKKEYGLSTNEIVELGNLCELT
SLKSTAIQNWVKRDIKDLIGHPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRSDDVISPIAYYESCA
YVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEELNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL

Sequences:

>Translated_233_residues
MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEFLTRYERKKQKKEYGLSTNEIVELGNLCELT
SLKSTAIQNWVKRDIKDLIGHPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRSDDVISPIAYYESCA
YVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEELNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL
>Mature_233_residues
MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEFLTRYERKKQKKEYGLSTNEIVELGNLCELT
SLKSTAIQNWVKRDIKDLIGHPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRSDDVISPIAYYESCA
YVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEELNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKRK_BACSU (O31656)

Other databases:

- EMBL:   AL009126
- PIR:   F69862
- RefSeq:   NP_389231.1
- ProteinModelPortal:   O31656
- EnsemblBacteria:   EBBACT00000001342
- GeneID:   939367
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13480
- NMPDR:   fig|224308.1.peg.1350
- GenoList:   BSU13480
- GeneTree:   EBGT00050000002723
- HOGENOM:   HBG337952
- OMA:   FNTITDR
- ProtClustDB:   CLSK887187
- BioCyc:   BSUB:BSU13480-MONOMER
- InterPro:   IPR014975

Pfam domain/function: PF08876 DUF1836

EC number: NA

Molecular weight: Translated: 26865; Mature: 26865

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEFLTRYERKKQK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
KEYGLSTNEIVELGNLCELTSLKSTAIQNWVKRDIKDLIGHPELGKKYSIEQAVILLIVR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLKSIYDFEHIRAILKVAFNTISDRSDDVISPIAYYESCAYVLDAIHHQDTPSMKESNLQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIAEQETERLRHRFEELNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEFLTRYERKKQK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
KEYGLSTNEIVELGNLCELTSLKSTAIQNWVKRDIKDLIGHPELGKKYSIEQAVILLIVR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLKSIYDFEHIRAILKVAFNTISDRSDDVISPIAYYESCAYVLDAIHHQDTPSMKESNLQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIAEQETERLRHRFEELNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377