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The map label for this gene is sspD

Identifier: 16078411

GI number: 16078411

Start: 1413800

End: 1413994

Strand: Reverse

Name: sspD

Synonym: BSU13470

Alternate gene names: 16078411

Gene position: 1413994-1413800 (Counterclockwise)

Preceding gene: 16078412

Following gene: 50812223

Centisome position: 33.54

GC content: 47.18

Gene sequence:

>195_bases
ATGGCGAGCAGAAATAAACTCGTTGTTCCAGGGGTGGAGCAGGCACTAGACCAATTTAAACTCGAAGTGGCTCAAGAATT
CGGTGTGAACCTTGGTTCTGATACAGTCGCACGCGCTAACGGCTCTGTAGGCGGAGAAATGACAAAGCGGCTGGTACAGC
AAGCACAATCACAATTAAATGGCACAACTAAATAA

Upstream 100 bases:

>100_bases
TTTATTTTTCTCCACAACAATTGCCAGCATAAATAAACCCCGTATATTTCAAACTAAATACGCGTTAAGAATTTCTTTAT
CGAAAAAGGAGATGAAAAAG

Downstream 100 bases:

>100_bases
ATTCAGGTCTTTATTCGCCGGGGGCACTCGGCGAATCTTCATTTTTAGCTGAATGATTATCACTGCTGTAGCCGTTTGGA
TTACGTCGGTCTGAAGCGTT

Product: small acid-soluble spore protein

Products: NA

Alternate protein names: SASP

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKRLVQQAQSQLNGTTK

Sequences:

>Translated_64_residues
MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKRLVQQAQSQLNGTTK
>Mature_63_residues
ASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKRLVQQAQSQLNGTTK

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSPD_BACSU (P04833)

Other databases:

- EMBL:   M12622
- EMBL:   AL009126
- PIR:   D24546
- RefSeq:   NP_389230.1
- ProteinModelPortal:   P04833
- SMR:   P04833
- EnsemblBacteria:   EBBACT00000002232
- GeneID:   939362
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13470
- NMPDR:   fig|224308.1.peg.1349
- GenoList:   BSU13470
- GeneTree:   EBGT00070000032074
- HOGENOM:   HBG727578
- OMA:   QIKYEIA
- ProtClustDB:   CLSK2393380
- BioCyc:   BSUB:BSU13470-MONOMER
- InterPro:   IPR001448
- InterPro:   IPR018126

Pfam domain/function: PF00269 SASP

EC number: NA

Molecular weight: Translated: 6804; Mature: 6673

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00304 SASP_1; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKRLVQQAQSQLN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCC
GTTK
CCCC
>Mature Secondary Structure 
ASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKRLVQQAQSQLN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCC
GTTK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3009398; 9384377; 9852018