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The map label for this gene is ykoI

Identifier: 16078392

GI number: 16078392

Start: 1394004

End: 1394684

Strand: Direct

Name: ykoI

Synonym: BSU13270

Alternate gene names: 16078392

Gene position: 1394004-1394684 (Clockwise)

Preceding gene: 16078391

Following gene: 16078393

Centisome position: 33.07

GC content: 41.41

Gene sequence:

>681_bases
ATGACTAAAACAATAAAAACAGTATCTTTTGCTGCAGCAGCCATTTTAGTTGTCATCATCTGTACGTTTCTCATCATTCG
GCAAACCCATGAGAACGTATTGTCAAAGGAGACTGTCGTAAAAAAAGTCGAAGCCTCTTATGAAGGCAAGGTCACGAAAG
CAACACAATCAAAGGATAAAAAAACATATGATATAACCCTTGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCA
ATATCGGCTGACATTCTTTCAATGAATAGAGTAAAAGCAGTGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCT
CGCGCTTGAGCGGGTGCCGGGAACGGTCAAAAAACAAACACGGCAAAGTCAAGTTGCCACTTATACCATACAAAAAGAAG
ACGGGAAAACATACGAAGTGAAGGTAGACATGCAGGCAAAAACAGTCTTGTCTGCCGATCAAATCAGCAGCAAAGATCAA
CAAAAAACGCCGATTACGAAAAAAGAAGCCAAAACAATTGCAGAGCGAAAAACGGGCGGAACAGCGGATGACGCAGATCT
CGAAGAAAGTGAGGGCACTCTCATCTTTGAAGTAGACGTTGATCTTCCTGATAATAAGGAAGCGACAGTGAAAATCAATG
CCTACACAGGAAAGGTAGCTAACATTGTGTATGAAGACTGA

Upstream 100 bases:

>100_bases
AAATCGCTGATGAGCATGGCATTGAGCTGTCTGTCAAAAGCAAGCCGGGACAAGGAACAGCTGTCACCATGCAATTCAGC
GAACAGAATGGGGGAGGCCG

Downstream 100 bases:

>100_bases
CGGTTTCTCATCAAATTCTCATCTTGCTCTCGTTTTCCTTTCATGTTGAGTATGTAAACTGTACTCATACAAAACAAAGG
AGGGCTCACAAATGCTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTKTIKTVSFAAAAILVVIICTFLIIRQTHENVLSKETVVKKVEASYEGKVTKATQSKDKKTYDITLENPKGTYFVKADA
ISADILSMNRVKAVNPSAMTEKEAEHLALERVPGTVKKQTRQSQVATYTIQKEDGKTYEVKVDMQAKTVLSADQISSKDQ
QKTPITKKEAKTIAERKTGGTADDADLEESEGTLIFEVDVDLPDNKEATVKINAYTGKVANIVYED

Sequences:

>Translated_226_residues
MTKTIKTVSFAAAAILVVIICTFLIIRQTHENVLSKETVVKKVEASYEGKVTKATQSKDKKTYDITLENPKGTYFVKADA
ISADILSMNRVKAVNPSAMTEKEAEHLALERVPGTVKKQTRQSQVATYTIQKEDGKTYEVKVDMQAKTVLSADQISSKDQ
QKTPITKKEAKTIAERKTGGTADDADLEESEGTLIFEVDVDLPDNKEATVKINAYTGKVANIVYED
>Mature_225_residues
TKTIKTVSFAAAAILVVIICTFLIIRQTHENVLSKETVVKKVEASYEGKVTKATQSKDKKTYDITLENPKGTYFVKADAI
SADILSMNRVKAVNPSAMTEKEAEHLALERVPGTVKKQTRQSQVATYTIQKEDGKTYEVKVDMQAKTVLSADQISSKDQQ
KTPITKKEAKTIAERKTGGTADDADLEESEGTLIFEVDVDLPDNKEATVKINAYTGKVANIVYED

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOI_BACSU (O34551)

Other databases:

- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   E69859
- RefSeq:   NP_389210.1
- ProteinModelPortal:   O34551
- EnsemblBacteria:   EBBACT00000003338
- GeneID:   939827
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13270
- NMPDR:   fig|224308.1.peg.1329
- GenoList:   BSU13270
- GeneTree:   EBGT00050000003086
- HOGENOM:   HBG345006
- OMA:   QGEIKYT
- ProtClustDB:   CLSK887174
- BioCyc:   BSUB:BSU13270-MONOMER
- GO:   GO:0006508
- InterPro:   IPR005075

Pfam domain/function: PF03413 PepSY

EC number: NA

Molecular weight: Translated: 24896; Mature: 24764

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe6c432c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTIKTVSFAAAAILVVIICTFLIIRQTHENVLSKETVVKKVEASYEGKVTKATQSKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
KTYDITLENPKGTYFVKADAISADILSMNRVKAVNPSAMTEKEAEHLALERVPGTVKKQT
EEEEEEEECCCCEEEEEECCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHH
RQSQVATYTIQKEDGKTYEVKVDMQAKTVLSADQISSKDQQKTPITKKEAKTIAERKTGG
HHCEEEEEEEECCCCCEEEEEEECHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
TADDADLEESEGTLIFEVDVDLPDNKEATVKINAYTGKVANIVYED
CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEECH
>Mature Secondary Structure 
TKTIKTVSFAAAAILVVIICTFLIIRQTHENVLSKETVVKKVEASYEGKVTKATQSKDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
KTYDITLENPKGTYFVKADAISADILSMNRVKAVNPSAMTEKEAEHLALERVPGTVKKQT
EEEEEEEECCCCEEEEEECCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHH
RQSQVATYTIQKEDGKTYEVKVDMQAKTVLSADQISSKDQQKTPITKKEAKTIAERKTGG
HHCEEEEEEEECCCCCEEEEEEECHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
TADDADLEESEGTLIFEVDVDLPDNKEATVKINAYTGKVANIVYED
CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377