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The map label for this gene is yjgD

Identifier: 16078282

GI number: 16078282

Start: 1288541

End: 1289101

Strand: Direct

Name: yjgD

Synonym: BSU12170

Alternate gene names: 16078282

Gene position: 1288541-1289101 (Clockwise)

Preceding gene: 16078281

Following gene: 16078283

Centisome position: 30.57

GC content: 45.28

Gene sequence:

>561_bases
ATGGCTAAAGCGATTAAACGAATCCAAAAAATCGAGGTAACAGAAGAGGATCAGCGAAAGCGTGATTTGCGGGAAATTGA
AGATGCTCTAATTGACCACAAAGAAGCGATTCTCGAAACATTGCATATGCTGGGCCATATGAACGAGCGCGGGGTCCTGC
CGTTGCTCCGCGGCCTTTTTGGTCAAGGGGATAAAGTTCTTGATATCCTGGTGAAAAAGGCAGATACAGAGGAAACAGCC
AATACGCTGAAAAATCTGCTTCTTCTGTTTGGAACACTCGGCATGCTGGACGTGAAGCAGCTGGAGCCTCTCATTTTGAA
AGTGAATGCGGGTGTGGCAAGCGCTGTAGAGCAGAAAAACAGTGAAGAAAAGACAGGTTATTTTGATATTATCCGCTCGC
TAAAAGACCCGGAAATCAACAAATCAATTACACTGCTCTTTTCCTTTTTAAAAGGAATGGGACAAGATACAAAGGAGCTG
GAACGCACGACGCAGCCTCCGGAACACCAAAAACATCATCAGGAACCCCGAGAGAAAAGAGGAATGAATAAGCGAGATTG
A

Upstream 100 bases:

>100_bases
GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCGGAAGGATTATATTTTCCCTGGTGACGCTGT
GAAAAGGGGGATGGGCCATA

Downstream 100 bases:

>100_bases
CCTCCCACCCGAGCGGCTTCAGCCAGCTCGGGTTTTTTGATGAAAAGGTCTAATGGACTAGTAAAAAATATTCAAATACT
AGGAAGAAGTAAGATTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAKAIKRIQKIEVTEEDQRKRDLREIEDALIDHKEAILETLHMLGHMNERGVLPLLRGLFGQGDKVLDILVKKADTEETA
NTLKNLLLLFGTLGMLDVKQLEPLILKVNAGVASAVEQKNSEEKTGYFDIIRSLKDPEINKSITLLFSFLKGMGQDTKEL
ERTTQPPEHQKHHQEPREKRGMNKRD

Sequences:

>Translated_186_residues
MAKAIKRIQKIEVTEEDQRKRDLREIEDALIDHKEAILETLHMLGHMNERGVLPLLRGLFGQGDKVLDILVKKADTEETA
NTLKNLLLLFGTLGMLDVKQLEPLILKVNAGVASAVEQKNSEEKTGYFDIIRSLKDPEINKSITLLFSFLKGMGQDTKEL
ERTTQPPEHQKHHQEPREKRGMNKRD
>Mature_185_residues
AKAIKRIQKIEVTEEDQRKRDLREIEDALIDHKEAILETLHMLGHMNERGVLPLLRGLFGQGDKVLDILVKKADTEETAN
TLKNLLLLFGTLGMLDVKQLEPLILKVNAGVASAVEQKNSEEKTGYFDIIRSLKDPEINKSITLLFSFLKGMGQDTKELE
RTTQPPEHQKHHQEPREKRGMNKRD

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJGD_BACSU (O34681)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   F69850
- RefSeq:   NP_389099.1
- ProteinModelPortal:   O34681
- EnsemblBacteria:   EBBACT00000002873
- GeneID:   939826
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12170
- NMPDR:   fig|224308.1.peg.1218
- GenoList:   BSU12170
- GeneTree:   EBGT00050000001698
- HOGENOM:   HBG337922
- OMA:   KTGYFDI
- ProtClustDB:   CLSK887099
- BioCyc:   BSUB:BSU12170-MONOMER
- InterPro:   IPR012440

Pfam domain/function: PF07849 DUF1641

EC number: NA

Molecular weight: Translated: 21272; Mature: 21141

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAIKRIQKIEVTEEDQRKRDLREIEDALIDHKEAILETLHMLGHMNERGVLPLLRGLF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
GQGDKVLDILVKKADTEETANTLKNLLLLFGTLGMLDVKQLEPLILKVNAGVASAVEQKN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHCC
SEEKTGYFDIIRSLKDPEINKSITLLFSFLKGMGQDTKELERTTQPPEHQKHHQEPREKR
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHHHHC
GMNKRD
CCCCCC
>Mature Secondary Structure 
AKAIKRIQKIEVTEEDQRKRDLREIEDALIDHKEAILETLHMLGHMNERGVLPLLRGLF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
GQGDKVLDILVKKADTEETANTLKNLLLLFGTLGMLDVKQLEPLILKVNAGVASAVEQKN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHCC
SEEKTGYFDIIRSLKDPEINKSITLLFSFLKGMGQDTKELERTTQPPEHQKHHQEPREKR
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHHHHC
GMNKRD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377