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The map label for this gene is yjbK

Identifier: 16078223

GI number: 16078223

Start: 1235912

End: 1236484

Strand: Reverse

Name: yjbK

Synonym: BSU11580

Alternate gene names: 16078223

Gene position: 1236484-1235912 (Counterclockwise)

Preceding gene: 16078228

Following gene: 16078222

Centisome position: 29.33

GC content: 41.54

Gene sequence:

>573_bases
ATGAGCCAAGAGATTGAAATCGAATTTAAAAACATGCTGACCAAACAAGAATTCAAAAACATAGCATCGGCACTCCAGCT
GACAGAAAAAGATTTTACAGATCAAAAGAATCATTATTTTGATACAGACAGCTTCGCGCTGAAACAAAAACATGCTGCGC
TTCGTATCCGCAGAAAAAACGGAAAGTATGTCCTTACATTAAAGGAGCCGGCTGATGTGGGGCTTCTGGAAACGCACCAG
CAGCTTTCAGAGGTATCAGATCTCGCTGGATTTTCAGTTCCCGAGGGCCCTGTGAAGGACCAGCTGCACAAGCTTCAGAT
CGATACGGATGCCATACAATACTTTGGATCTTTAGCAACAAACCGTGCGGAAAAAGAAACAGAAAAAGGCTTAATAGTTT
TAGACCACAGCCGATATTTAAATAAAGAGGACTATGAAATTGAATTTGAGGCGGCGGATTGGCATGAGGGCAGACAAGCC
TTCGAAAAGCTGCTTCAGCAATTCAGCATTCCTCAGCGCGAAACCAAAAATAAAATTCTGCGTTTTTATGAAGAAAAACG
AAAGTCTATATAA

Upstream 100 bases:

>100_bases
TACAGATTCATTTTATCATATCGAGCTCGATATTGATAAACCTAACATCTAAAGAGATAATAGTAAAAATAAGATTTACA
GGGCGGAAAGGAAGAGCATC

Downstream 100 bases:

>100_bases
GGTGGAATGACATCGTGAATGTAACGAATTGGGCAGCATTACTTCAGCTTCAGGCATTACAGTCCATATCTAATGCACGC
AGCAGCTCGGACACTCAGAA

Product: RNA/thiamine triphosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSQEIEIEFKNMLTKQEFKNIASALQLTEKDFTDQKNHYFDTDSFALKQKHAALRIRRKNGKYVLTLKEPADVGLLETHQ
QLSEVSDLAGFSVPEGPVKDQLHKLQIDTDAIQYFGSLATNRAEKETEKGLIVLDHSRYLNKEDYEIEFEAADWHEGRQA
FEKLLQQFSIPQRETKNKILRFYEEKRKSI

Sequences:

>Translated_190_residues
MSQEIEIEFKNMLTKQEFKNIASALQLTEKDFTDQKNHYFDTDSFALKQKHAALRIRRKNGKYVLTLKEPADVGLLETHQ
QLSEVSDLAGFSVPEGPVKDQLHKLQIDTDAIQYFGSLATNRAEKETEKGLIVLDHSRYLNKEDYEIEFEAADWHEGRQA
FEKLLQQFSIPQRETKNKILRFYEEKRKSI
>Mature_189_residues
SQEIEIEFKNMLTKQEFKNIASALQLTEKDFTDQKNHYFDTDSFALKQKHAALRIRRKNGKYVLTLKEPADVGLLETHQQ
LSEVSDLAGFSVPEGPVKDQLHKLQIDTDAIQYFGSLATNRAEKETEKGLIVLDHSRYLNKEDYEIEFEAADWHEGRQAF
EKLLQQFSIPQRETKNKILRFYEEKRKSI

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJBK_BACSU (O31609)

Other databases:

- EMBL:   AL009126
- PIR:   C69844
- RefSeq:   NP_389040.1
- HSSP:   Q9K901
- ProteinModelPortal:   O31609
- SMR:   O31609
- EnsemblBacteria:   EBBACT00000000370
- GeneID:   936408
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11580
- NMPDR:   fig|224308.1.peg.1159
- GenoList:   BSU11580
- GeneTree:   EBGT00050000002463
- HOGENOM:   HBG517186
- OMA:   GINHEDL
- ProtClustDB:   CLSK887069
- BioCyc:   BSUB:BSU11580-MONOMER
- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195
- PIRSF:   PIRSF012526

Pfam domain/function: PF01928 CYTH; SSF55154 mRNA_capping_enz_bsu

EC number: NA

Molecular weight: Translated: 22238; Mature: 22107

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEIEIEFKNMLTKQEFKNIASALQLTEKDFTDQKNHYFDTDSFALKQKHAALRIRRKN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECC
GKYVLTLKEPADVGLLETHQQLSEVSDLAGFSVPEGPVKDQLHKLQIDTDAIQYFGSLAT
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
NRAEKETEKGLIVLDHSRYLNKEDYEIEFEAADWHEGRQAFEKLLQQFSIPQRETKNKIL
CHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFYEEKRKSI
HHHHHHHHCC
>Mature Secondary Structure 
SQEIEIEFKNMLTKQEFKNIASALQLTEKDFTDQKNHYFDTDSFALKQKHAALRIRRKN
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECC
GKYVLTLKEPADVGLLETHQQLSEVSDLAGFSVPEGPVKDQLHKLQIDTDAIQYFGSLAT
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
NRAEKETEKGLIVLDHSRYLNKEDYEIEFEAADWHEGRQAFEKLLQQFSIPQRETKNKIL
CHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFYEEKRKSI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377