Click here to switch to the map view.

The map label for this gene is yhjO

Identifier: 16078122

GI number: 16078122

Start: 1132179

End: 1133384

Strand: Reverse

Name: yhjO

Synonym: BSU10580

Alternate gene names: 16078122

Gene position: 1133384-1132179 (Counterclockwise)

Preceding gene: 16078124

Following gene: 16078121

Centisome position: 26.89

GC content: 48.26

Gene sequence:

>1206_bases
ATGTTGACCAGTTTTCACTCTATAAAATCGAGATATACCGCTCCCGTTCGGCTCCGCTTTTTCGGCGAATTGCTGACAAG
CCTGACAGGTGCAATGATGGGACCTTTTATGGTGCTGTATCTGCATGAACAATTAAACGGCAGTATCATGATGCCAATGC
TGATCATCAGCCTTCAGCCATTTGCTGATATTTTCCTGACGCTCGCTGCAGGACGGGTGACGGATCGGCTTGGGCGGCGC
ACAGCGATTTTGACCGCATTGCTTCTTCAATCAGCGGCAATGACAGGGTTTGTATTTGCTGAGCATGCGTATGTTTTCGC
TATTCTCTATGTCATGAATGGCATCGGAAGATCGTTGTACATTCCCGCTTCCCGCGCCCAAATCGCTGAAAGCACGCCGG
AAAGCAGACGTTCGGAAGTGTTTGCGGTCATCAATGCGATCTATTCGACGGGTCTGACGGCAGGACCGCTAGTGGGGATG
CTGCTGTACAATCATAACCCCGTGTGGATATTCGCATTAGATGCTGCAGCATTGTTTATCTACTTTCTGATCGCTGCACT
GAAACTGCCTGAGACAAAGCCGCTACACCCAGCTGTTACCCCGAAAATGTCCGCGAGCTTTACAATATACAGGCCTGTCC
TGCTTCTTTTGCTGCTTTCTCTCCCCATCAGCATGTTATATGCACAAACAGAAACAACATACAGGCTGTTCAGCAAAAAC
ATGTTTTCTGATTATCTGTCCATGCTGACCATCTATTCAGCAGCAAAAGCTTTATTCAGCTGTGTTCTCCAAGTACCTCT
TGTCAAAGGGACCGAAAAGCTTTCAATGAAAACGATCCTCTTCATTACTTATATTTGCTACTCCCTTGCGGCAGCCGGCT
TTGCATGCTCAACCTCTCTGACAATGCTTTTAGTGACGGCAGCGGTGATGACGGTTGGTGAAAGCATCGGGCTAACCCAC
ATCCAGACCTTCATATCGAAATTGGCGCCGCCTCATTTGCTGGGCCGGTTTTATGCTGTCTATGGTCTGCATTGGGATAT
ATCCCGCTCAATCGGACCGCTGGCAGGCGGGCTGATCCTGACATCATTTGGCGGAGAAGTGATTTTTTACGCTCTTGCCG
TGTGTCTGCTGACAGCGGGTTTATCTCTGACTTACACAATAGAAAAGCTCGAACACAAGGTCATAAGAAAAGTGAATCGC
TTATAG

Upstream 100 bases:

>100_bases
CGACAAAAGGGGAACTTTTATCTCTTCTTTTCTTCACTTTTTGGGCCGCCGCCCCTTCTATACACTACTACTATATCAAA
CAGCGAAAGGCGGCGATCAC

Downstream 100 bases:

>100_bases
AAAATAATTCATAATTTCTTTATCAACAAAAATATACTATAGTAATAAATACATTCACTACGTGAACAATTGGAGTGTTA
CGTGAAAAAGGAAGAAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MLTSFHSIKSRYTAPVRLRFFGELLTSLTGAMMGPFMVLYLHEQLNGSIMMPMLIISLQPFADIFLTLAAGRVTDRLGRR
TAILTALLLQSAAMTGFVFAEHAYVFAILYVMNGIGRSLYIPASRAQIAESTPESRRSEVFAVINAIYSTGLTAGPLVGM
LLYNHNPVWIFALDAAALFIYFLIAALKLPETKPLHPAVTPKMSASFTIYRPVLLLLLLSLPISMLYAQTETTYRLFSKN
MFSDYLSMLTIYSAAKALFSCVLQVPLVKGTEKLSMKTILFITYICYSLAAAGFACSTSLTMLLVTAAVMTVGESIGLTH
IQTFISKLAPPHLLGRFYAVYGLHWDISRSIGPLAGGLILTSFGGEVIFYALAVCLLTAGLSLTYTIEKLEHKVIRKVNR
L

Sequences:

>Translated_401_residues
MLTSFHSIKSRYTAPVRLRFFGELLTSLTGAMMGPFMVLYLHEQLNGSIMMPMLIISLQPFADIFLTLAAGRVTDRLGRR
TAILTALLLQSAAMTGFVFAEHAYVFAILYVMNGIGRSLYIPASRAQIAESTPESRRSEVFAVINAIYSTGLTAGPLVGM
LLYNHNPVWIFALDAAALFIYFLIAALKLPETKPLHPAVTPKMSASFTIYRPVLLLLLLSLPISMLYAQTETTYRLFSKN
MFSDYLSMLTIYSAAKALFSCVLQVPLVKGTEKLSMKTILFITYICYSLAAAGFACSTSLTMLLVTAAVMTVGESIGLTH
IQTFISKLAPPHLLGRFYAVYGLHWDISRSIGPLAGGLILTSFGGEVIFYALAVCLLTAGLSLTYTIEKLEHKVIRKVNR
L
>Mature_401_residues
MLTSFHSIKSRYTAPVRLRFFGELLTSLTGAMMGPFMVLYLHEQLNGSIMMPMLIISLQPFADIFLTLAAGRVTDRLGRR
TAILTALLLQSAAMTGFVFAEHAYVFAILYVMNGIGRSLYIPASRAQIAESTPESRRSEVFAVINAIYSTGLTAGPLVGM
LLYNHNPVWIFALDAAALFIYFLIAALKLPETKPLHPAVTPKMSASFTIYRPVLLLLLLSLPISMLYAQTETTYRLFSKN
MFSDYLSMLTIYSAAKALFSCVLQVPLVKGTEKLSMKTILFITYICYSLAAAGFACSTSLTMLLVTAAVMTVGESIGLTH
IQTFISKLAPPHLLGRFYAVYGLHWDISRSIGPLAGGLILTSFGGEVIFYALAVCLLTAGLSLTYTIEKLEHKVIRKVNR
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

Organism=Escherichia coli, GI1787815, Length=354, Percent_Identity=20.6214689265537, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJO_BACSU (O07569)

Other databases:

- EMBL:   Y14081
- EMBL:   AL009126
- PIR:   F69834
- RefSeq:   NP_388939.1
- ProteinModelPortal:   O07569
- EnsemblBacteria:   EBBACT00000002508
- GeneID:   939780
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10580
- NMPDR:   fig|224308.1.peg.1058
- GenoList:   BSU10580
- GeneTree:   EBGT00070000031785
- HOGENOM:   HBG337432
- OMA:   MASSIRG
- PhylomeDB:   O07569
- ProtClustDB:   CLSK887023
- BioCyc:   BSUB:BSU10580-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 44066; Mature: 44066

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe1eba68)-; HASH(0xdbfafbc)-; HASH(0xd18d6e4)-; HASH(0xdc1dbdc)-; HASH(0xd227ff8)-; HASH(0xcbd168c)-; HASH(0xcba1974)-; HASH(0xcb66618)-; HASH(0xd6d70c0)-; HASH(0xb348af4)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSFHSIKSRYTAPVRLRFFGELLTSLTGAMMGPFMVLYLHEQLNGSIMMPMLIISLQP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCH
FADIFLTLAAGRVTDRLGRRTAILTALLLQSAAMTGFVFAEHAYVFAILYVMNGIGRSLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IPASRAQIAESTPESRRSEVFAVINAIYSTGLTAGPLVGMLLYNHNPVWIFALDAAALFI
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHH
YFLIAALKLPETKPLHPAVTPKMSASFTIYRPVLLLLLLSLPISMLYAQTETTYRLFSKN
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFSDYLSMLTIYSAAKALFSCVLQVPLVKGTEKLSMKTILFITYICYSLAAAGFACSTSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TMLLVTAAVMTVGESIGLTHIQTFISKLAPPHLLGRFYAVYGLHWDISRSIGPLAGGLIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEHHCCCCHHHCCHHH
TSFGGEVIFYALAVCLLTAGLSLTYTIEKLEHKVIRKVNRL
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLTSFHSIKSRYTAPVRLRFFGELLTSLTGAMMGPFMVLYLHEQLNGSIMMPMLIISLQP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCH
FADIFLTLAAGRVTDRLGRRTAILTALLLQSAAMTGFVFAEHAYVFAILYVMNGIGRSLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IPASRAQIAESTPESRRSEVFAVINAIYSTGLTAGPLVGMLLYNHNPVWIFALDAAALFI
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHH
YFLIAALKLPETKPLHPAVTPKMSASFTIYRPVLLLLLLSLPISMLYAQTETTYRLFSKN
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFSDYLSMLTIYSAAKALFSCVLQVPLVKGTEKLSMKTILFITYICYSLAAAGFACSTSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TMLLVTAAVMTVGESIGLTHIQTFISKLAPPHLLGRFYAVYGLHWDISRSIGPLAGGLIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEHHCCCCHHHCCHHH
TSFGGEVIFYALAVCLLTAGLSLTYTIEKLEHKVIRKVNRL
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377