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The map label for this gene is yhjN

Identifier: 16078121

GI number: 16078121

Start: 1130918

End: 1132072

Strand: Reverse

Name: yhjN

Synonym: BSU10570

Alternate gene names: 16078121

Gene position: 1132072-1130918 (Counterclockwise)

Preceding gene: 16078122

Following gene: 16078119

Centisome position: 26.85

GC content: 50.13

Gene sequence:

>1155_bases
TTGAAGAAAGACGAAAATCTCCTCAAAGATCTATGGTTTATCGCAATCAGTGCAGCCGGGGGGTTTATTCTTTCATTAAC
CGGAATATCAATTGGATGGATGATCGGAACACTGATTGTCGCCTGCTGCCTCGCCATGATACGGCCGGCATGGCTGATGA
TGGCACCAGACCAAAAAGGAATTAACCGACGATGGCTCGCCCTCGGGCAGATGATCCTCGGCATCGAATTGGGCCAAAAG
CTGAATTTATCCGTTCTCTCTGTTCTCAAAGACCATTGGTTTTCAGTCGGCGTTATGCTGATATTGTCTATCCTGCTGGC
CATGCTGTCAGGATATGTGCTTTGGCGTTTCAGCAAAACGGATATGATGACTAGCTTTGTCGGCACCGCTCCCGGCGGAC
TTTCCGCCATGCCGAGCATCGCACAGGAAGTAGGCGCCAATACCGCTATAGTCAGCCTCGTTCAAATGATGCGTGTGCTG
CTCGTGGTGCTTTCCATTCCGTTTTTAGTCATTCTGATCTATACAAAACAAGATCGTACCGCAAGTGCCGCAGCAGAGAC
GATTTCTTCTGCAACGACAGATTTTAGGCTCGCTCCCGTTTTGTGGACCGTCATTCTTATTCTCGCTGCCTGGGGAGCTT
GCAAAGCTGCGAAATTTTTAAAATTTCCAGCTCCATGGCTGCTCGGCAGCATGCTCGGTGTAGCAATTGTACATGTTGGC
GGAGCTGCGGTGACAGGGCACGACATGACGGCATGGTGGTTGTCACAAGCTAACCATGTATCACAAGTATTTCTCGGGGC
AACGATCGGCTCTAAGATGTACAAAAGCATGTTTGCCGGCGTCACCCGTATTATCATCGTCGGGTTTGTCTCGTCCGTCG
GTTTAATCGCAGCAATGTTTTTGAGCGCCGTGATCGTTTCCGAGCTGACAGGAATTTCGCTCATCACTTCTGTTCTGGCA
TTTGCGCCCGGCGGGATTGCAGAGATGGCGACGACGTCAGTTACCTTACATGCTGATTCCACCTTTGTCGTTGCGGTTCA
GGTCATTCGCGTCATTCTGGTTATTGCCCTGCTGCCGCCGTTTTATCGCCTGCTTCACCATCTTCATGGTGAAAAAAAAG
ACAAAAAGAGCTCAATCAGCGGCAGTAGTGCCTAG

Upstream 100 bases:

>100_bases
ATTCATAATTTCTTTATCAACAAAAATATACTATAGTAATAAATACATTCACTACGTGAACAATTGGAGTGTTACGTGAA
AAAGGAAGAAGGGTTTTACA

Downstream 100 bases:

>100_bases
TTGAAAAAAGGGTTCAAGAACTTTTAATTCGCAAACCATCGAGATGAGGAAATATAAGCGGATATTTCGTTGTTAATGGA
TCAGATTTGAAGTGAGTGCT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKKDENLLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKGINRRWLALGQMILGIELGQK
LNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVL
LVVLSIPFLVILIYTKQDRTASAAAETISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVG
GAAVTGHDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSVLA
FAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGEKKDKKSSISGSSA

Sequences:

>Translated_384_residues
MKKDENLLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKGINRRWLALGQMILGIELGQK
LNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVL
LVVLSIPFLVILIYTKQDRTASAAAETISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVG
GAAVTGHDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSVLA
FAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGEKKDKKSSISGSSA
>Mature_384_residues
MKKDENLLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKGINRRWLALGQMILGIELGQK
LNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVL
LVVLSIPFLVILIYTKQDRTASAAAETISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVG
GAAVTGHDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSVLA
FAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGEKKDKKSSISGSSA

Specific function: Seems To Be Involved In The Regulation Of Aidb. [C]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJN_BACSU (O07568)

Other databases:

- EMBL:   Y14081
- EMBL:   AL009126
- PIR:   E69834
- RefSeq:   NP_388938.1
- ProteinModelPortal:   O07568
- EnsemblBacteria:   EBBACT00000001970
- GeneID:   939324
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10570
- NMPDR:   fig|224308.1.peg.1057
- GenoList:   BSU10570
- GeneTree:   EBGT00050000003021
- HOGENOM:   HBG338689
- OMA:   SEIPNGR
- PhylomeDB:   O07568
- ProtClustDB:   CLSK887022
- BioCyc:   BSUB:BSU10570-MONOMER
- InterPro:   IPR017516
- InterPro:   IPR007820
- TIGRFAMs:   TIGR03082

Pfam domain/function: PF05145 AmoA

EC number: NA

Molecular weight: Translated: 41030; Mature: 41030

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xded9a38)-; HASH(0xdc4f354)-; HASH(0xc8c8a58)-; HASH(0xde6595c)-; HASH(0xe20ddd0)-; HASH(0xbb931ac)-; HASH(0xd1d44b0)-; HASH(0xe0d38c4)-; HASH(0xe0dff50)-; HASH(0xe219b3c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDENLLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKG
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCC
INRRWLALGQMILGIELGQKLNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKT
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHH
DMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVLLVVLSIPFLVILIYTKQDRT
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ASAAAETISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GAAVTGHDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMF
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAVIVSELTGISLITSVLAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
FYRLLHHLHGEKKDKKSSISGSSA
HHHHHHHHCCCCCHHHHCCCCCCH
>Mature Secondary Structure
MKKDENLLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKG
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCC
INRRWLALGQMILGIELGQKLNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKT
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHH
DMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVLLVVLSIPFLVILIYTKQDRT
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ASAAAETISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GAAVTGHDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMF
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAVIVSELTGISLITSVLAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
FYRLLHHLHGEKKDKKSSISGSSA
HHHHHHHHCCCCCHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377