BacMap

Definition	Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.
Accession	NC_000964
Length	4,215,606

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The map label for this gene is yhxC

Identifier: 16078104

GI number: 16078104

Start: 1115698

End: 1116555

Strand: Direct

Name: yhxC

Synonym: BSU10400

Alternate gene names: 16078104

Gene position: 1115698-1116555 (Clockwise)

Preceding gene: 255767239

Following gene: 16078106

Centisome position: 26.47

GC content: 48.02

Gene sequence:

>858_bases
TTGGCGAATCAAAAAAAGAAAACATTACCGCCTCAGCACCAGAACCAGCAGCCTGGTTTTGAATATCTGATGGACCCGCG
TCCGGTTTTTGATAAGCCGAAGAAAGCGAAAAAATTAGAGGGCAAAACCGCTATTATTACTGGAGGAGACAGCGGGATTG
GACGCGCTGTCTCGGTGTTATTCGCAAAAGAAGGGGCTAATGTGGTCATTGTGTATTTGAATGAACATCAGGACGCCGAG
GAAACAAAGCAGTATGTAGAAAAGGAAGGGGTAAAATGCCTGCTGATTGCAGGAGATGTCGGGGATGAAGCGTTTTGCAA
TGATGTGGTCGGGCAGGCAAGCCAAGTGTTTCCATCCATTGATATATTGGTTAACAATGCAGCTGAGCAGCATGTCCAGC
CCAGCATTGAAAAAATCACCAGCCACCAGCTGATCAGAACCTTCCAAACAAACATTTTTTCCATGTTTTACTTAACAAAG
GCAGTGCTGCCTCATTTAAAAAAAGGGAGCTCTATTATTAATACCGCTTCAATTACCGCCTATAAAGGCAATAAAACGCT
GATCGATTATTCAGCGACAAAAGGCGCGATCGTTACGTTTACAAGGTCCCTTTCCCAGTCGCTTGTTCAGCAGGGCATAC
GGGTCAATGCAGTGGCACCGGGTCCCATTTGGACACCGCTTATCCCGGCCAGCTTTGCCGCAAAAGACGTGGAAGTGTTT
GGTTCAGACGTGCCGATGGAACGCCCGGGGCAGCCGGTCGAAGTGGCGCCAAGCTATCTATACCTTGCCAGCGACGATTC
CACATACGTCACAGGGCAGACGATTCACGTCAATGGCGGAACAATTGTGAACGGATAA

Upstream 100 bases:

>100_bases
TCCAATCAGATTTATTCTTAATTTTTCCATATTCTATCTTTTCATACATAGGAAGCAGGCATTGTTCATAACATAATAAG
GTTGAAAAGGAGTGATTTCA

Downstream 100 bases:

>100_bases
TAAAAAGCCAATCCTTGAAGGATTGGCTTATTCGCTCTGCTTGAGCGCTGCATATTCTTTAGAGAGCGTAAGAAACGCAT
CTTTATCTTTTTCGTCCAAG

Product: oxidoreductase

Products: NA

Alternate protein names: ORFX

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAE
ETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTK
AVLPHLKKGSSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVF
GSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG

Sequences:

>Translated_285_residues
MANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAE
ETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTK
AVLPHLKKGSSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVF
GSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG
>Mature_284_residues
ANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAEE
TKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKA
VLPHLKKGSSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVFG
SDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family

Homologues:

Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=31.3008130081301, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=30.6772908366534, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=30.0411522633745, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=32.6086956521739, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=30.46875, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=29.0322580645161, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=30.6772908366534, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=29.8449612403101, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=27.3092369477912, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=29.2682926829268, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI210032110, Length=197, Percent_Identity=29.9492385786802, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=28.4552845528455, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI310128830, Length=231, Percent_Identity=26.8398268398268, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI310115468, Length=231, Percent_Identity=26.8398268398268, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=27.5193798449612, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI142976729, Length=211, Percent_Identity=28.9099526066351, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI210032112, Length=196, Percent_Identity=29.5918367346939, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=229, Percent_Identity=27.5109170305677, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7706318, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI32455239, Length=172, Percent_Identity=28.4883720930233, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI5031765, Length=172, Percent_Identity=28.4883720930233, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1789378, Length=276, Percent_Identity=43.1159420289855, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=34.8, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=33.6065573770492, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=33.984375, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=32.9317269076305, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=29.9595141700405, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=29.1497975708502, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=30.1587301587302, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=28.2258064516129, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=28.8065843621399, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=26.4591439688716, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787526, Length=250, Percent_Identity=25.2, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=34.9019607843137, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=34.8659003831418, Blast_Score=127, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=34.8314606741573, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=34.469696969697, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=34.3396226415094, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=33.0827067669173, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=35.7429718875502, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=34.9397590361446, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=33.8403041825095, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=32.9457364341085, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=34.2105263157895, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=33.9622641509434, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=28.3400809716599, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=31.9391634980989, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=33.0827067669173, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=34.3629343629344, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=32.9588014981273, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=28.996282527881, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=31.0861423220974, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.9236947791165, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.5220883534137, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17536025, Length=265, Percent_Identity=27.9245283018868, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=26.8774703557312, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI212645366, Length=256, Percent_Identity=28.90625, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=27.2373540856031, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=246, Percent_Identity=30.0813008130081, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=30.3643724696356, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=187, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=188, Percent_Identity=29.2553191489362, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=199, Percent_Identity=28.643216080402, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=204, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=25.6809338521401, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=233, Percent_Identity=25.3218884120172, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6324126, Length=266, Percent_Identity=26.6917293233083, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=34.2857142857143, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=33.8775510204082, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=31.8725099601594, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=30.4878048780488, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=31.7269076305221, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=31.1475409836066, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=28.515625, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24644337, Length=270, Percent_Identity=32.5925925925926, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281364892, Length=191, Percent_Identity=30.8900523560209, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI161076933, Length=205, Percent_Identity=27.8048780487805, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584748, Length=205, Percent_Identity=27.8048780487805, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581726, Length=193, Percent_Identity=29.5336787564767, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356301, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584744, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574402, Length=207, Percent_Identity=25.1207729468599, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21358495, Length=215, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHXC_BACSU (P40397)

Other databases:

- EMBL:   Y14084
- EMBL:   AL009126
- EMBL:   S70734
- PIR:   D69835
- RefSeq:   NP_388921.1
- ProteinModelPortal:   P40397
- SMR:   P40397
- EnsemblBacteria:   EBBACT00000001828
- GeneID:   939316
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10400
- NMPDR:   fig|224308.1.peg.1040
- GenoList:   BSU10400
- GeneTree:   EBGT00070000031724
- HOGENOM:   HBG750976
- OMA:   IPSTFTE
- PhylomeDB:   P40397
- ProtClustDB:   CLSK887008
- BioCyc:   BSUB:BSU10400-MONOMER
- GO:   GO:0005488
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR19410
- PRINTS:   PR00081
- PRINTS:   PR00080

Pfam domain/function: PF00106 adh_short

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30846; Mature: 30714

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00061 ADH_SHORT

Important sites: ACT_SITE 190-190 BINDING 177-177

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHEEEE
FAKEGANVVIVYLNEHQDAEETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSI
EEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCE
DILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKGSSIINTASITA
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
YKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVF
ECCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHC
GSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG
CCCCCCCCCCCCEEECCCEEEEECCCCEEEEEEEEEECCCEEECC
>Mature Secondary Structure 
ANQKKKTLPPQHQNQQPGFEYLMDPRPVFDKPKKAKKLEGKTAIITGGDSGIGRAVSVL
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHEEEE
FAKEGANVVIVYLNEHQDAEETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSI
EEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCE
DILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKGSSIINTASITA
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
YKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVF
ECCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHC
GSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIHVNGGTIVNG
CCCCCCCCCCCCEEECCCEEEEECCCCEEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8196543