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The map label for this gene is yhfQ

Identifier: 255767239

GI number: 255767239

Start: 1107733

End: 1108704

Strand: Direct

Name: yhfQ

Synonym: BSU10330

Alternate gene names: 255767239

Gene position: 1107733-1108704 (Clockwise)

Preceding gene: 16078096

Following gene: 16078104

Centisome position: 26.28

GC content: 45.27

Gene sequence:

>972_bases
ATGAAAAAAACACTGATTATTCTTACAGTTTTACTTCTTTCTGTCTTAACGGCTGCTTGCTCGTCTTCAAGCGGCAATCA
AAACAGTAAAGAACATAAAGTGGCGGTAACACATGATTTAGGGAAGACAAATGTGCCTGAGCATCCGAAGCGGGTTGTTG
TTCTTGAGCTAGGTTTTATTGATACACTGCTTGATCTCGGCATTACGCCTGTCGGGGTTGCCGATGACAACAAAGCGAAG
CAGCTGATCAACAAGGATGTGCTGAAGAAAATTGACGGCTACACATCTGTCGGCACTCGCTCACAGCCAAGCATGGAAAA
AATCGCTTCATTAAAACCCGATTTAATTATTGCTGACACGACCCGGCATAAGAAGGTGTACGATCAGCTGAAAAAAATAG
CGCCGACGATTGCACTTAATAATTTAAATGCTGATTATCAGGATACAATTGACGCTTCGCTTACGATTGCAAAAGCAGTC
GGCAAGGAGAAGGAAATGGAGAAAAAGCTGACGGCGCATGAAGAAAAGCTTAGCGAGACAAAGCAGAAAATCAGCGCGAA
CAGCCAGTCCGTGCTTTTGATCGGAAATACAAATGATACCATTATGGCCAGGGATGAAAACTTCTTTACATCGAGACTTT
TAACACAGGTCGGCTACCGATATGCAATCAGTACGTCAGGCAATAGCGATTCAAGCAATGGCGGCGACTCTGTGAATATG
AAAATGACACTGGAGCAGCTGCTGAAAACAGATCCGGATGTGATCATCCTGATGACAGGAAAAACAGATGACCTCGACGC
CGACGGTAAACGCCCGATCGAAAAGAATGTCCTTTGGAAAAAACTGAAGGCAGTGAAAAACGGGCATGTATACCACGTGG
ATCGTGCGGTGTGGTCTCTGCGCCGCAGTGTAGACGGGGCGAATGCCATTTTGGACGAGCTTCAAAAAGAGATGCCGGCT
GCTAAGAAATAA

Upstream 100 bases:

>100_bases
CTCATTTTAAAAATAATTGGTGATAATGATTCTCATTCCGTGTTATACTACTCTTGGACATCTTAACCATAGAAACTACC
AACAGGAGAGACTGGAACAT

Downstream 100 bases:

>100_bases
AAGAAAAGACAGGCAAACGCCTGTCTTTTTCTTATTTGATAAAGCCGGATAAGTGGCTGTTGATATTATAGTCTTTTATC
CGCCATTTTTCTTCTGCAAA

Product: iron(III) dicitrate-binding lipoprotein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFIDTLLDLGITPVGVADDNKAK
QLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAV
GKEKEMEKKLTAHEEKLSETKQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNM
KMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSLRRSVDGANAILDELQKEMPA
AKK

Sequences:

>Translated_323_residues
MKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFIDTLLDLGITPVGVADDNKAK
QLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAV
GKEKEMEKKLTAHEEKLSETKQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNM
KMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSLRRSVDGANAILDELQKEMPA
AKK
>Mature_323_residues
MKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFIDTLLDLGITPVGVADDNKAK
QLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAV
GKEKEMEKKLTAHEEKLSETKQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNM
KMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSLRRSVDGANAILDELQKEMPA
AKK

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG4594

COG function: function code P; ABC-type Fe3+-citrate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain

Homologues:

Organism=Escherichia coli, GI87082411, Length=290, Percent_Identity=31.7241379310345, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1786807, Length=298, Percent_Identity=25.503355704698, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFQ_BACSU (C0SP94)

Other databases:

- EMBL:   Y14084
- EMBL:   AL009126
- PIR:   F69831
- RefSeq:   NP_388914.2
- ProteinModelPortal:   C0SP94
- SMR:   C0SP94
- EnsemblBacteria:   EBBACT00000001357
- GeneID:   936324
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10330
- GenoList:   BSU10330
- GeneTree:   EBGT00070000032029
- ProtClustDB:   CLSK887004
- BioCyc:   BSUB:BSU10330-MONOMER
- InterPro:   IPR002491

Pfam domain/function: PF01497 Peripla_BP_2

EC number: NA

Molecular weight: Translated: 35489; Mature: 35489

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50983 FE_B12_PBP; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHH
DTLLDLGITPVGVADDNKAKQLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADT
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEECC
TRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAVGKEKEMEKKLTAHEEKLSET
CHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNM
HHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEH
KMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSL
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHH
RRSVDGANAILDELQKEMPAAKK
HHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHH
DTLLDLGITPVGVADDNKAKQLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADT
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEECC
TRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAVGKEKEMEKKLTAHEEKLSET
CHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNM
HHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEH
KMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSL
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHH
RRSVDGANAILDELQKEMPAAKK
HHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377