Click here to switch to the map view.

The map label for this gene is yhfM

Identifier: 16078092

GI number: 16078092

Start: 1102560

End: 1102955

Strand: Reverse

Name: yhfM

Synonym: BSU10280

Alternate gene names: 16078092

Gene position: 1102955-1102560 (Counterclockwise)

Preceding gene: 255767238

Following gene: 16078087

Centisome position: 26.16

GC content: 39.9

Gene sequence:

>396_bases
ATGAAAAAAATAGTGGCAGCCATCGTGGTAATCGGTCTTGTGTTTATCGCATTTTTTTATCTTTACAGCCGATCAGGCGA
TGTGTATCAATCGGTAGACGCGGATTTGATCACACTGTCTTCAAGCGGCCAGGAAGATATCGAGATTGAAAAAAGACAGC
ACGTCAAAGATATGCTGGATATTATGAATCAGGGAAAACAGGTGAAGACAGAAAAAACATCAGCCCCTGATTACGAAGGG
ACAATCAAGTTTCATAAAGACCGGTATGACTCATTCAGACTATGGATTGACGGCAGCCAGCAAGCCGTTTTTTTGAAGGA
TGGCACATACTACAAATTAAGCAAAAATGATACAAAGGCGCTGCTAAATATTATTAAAAAAGAAGCAAAGGATTGA

Upstream 100 bases:

>100_bases
TTCAAATTCTTAGAACCAAGCTGTGTTCCGCACTTTTCCACCCTTTTAAGCATGGAAACCCCGATCGCTGGGAAAACTAA
CAATGTTTGGAGTGATGCAA

Downstream 100 bases:

>100_bases
AAATGAAAAAGCGAAGCTAACCGCTTCGCTTTTTCATTTTATTGGGGCAAAATATCTCTCAGTGCCCGTCTGAGCATTTT
CCCCGTCGCATTTTTCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDIEIEKRQHVKDMLDIMNQGKQVKTEKTSAPDYEG
TIKFHKDRYDSFRLWIDGSQQAVFLKDGTYYKLSKNDTKALLNIIKKEAKD

Sequences:

>Translated_131_residues
MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDIEIEKRQHVKDMLDIMNQGKQVKTEKTSAPDYEG
TIKFHKDRYDSFRLWIDGSQQAVFLKDGTYYKLSKNDTKALLNIIKKEAKD
>Mature_131_residues
MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDIEIEKRQHVKDMLDIMNQGKQVKTEKTSAPDYEG
TIKFHKDRYDSFRLWIDGSQQAVFLKDGTYYKLSKNDTKALLNIIKKEAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFM_BACSU (O07611)

Other databases:

- EMBL:   Y14083
- EMBL:   AL009126
- PIR:   B69831
- RefSeq:   NP_388909.1
- EnsemblBacteria:   EBBACT00000003328
- GeneID:   936312
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10280
- NMPDR:   fig|224308.1.peg.1028
- GenoList:   BSU10280
- GeneTree:   EBGT00050000000758
- HOGENOM:   HBG338684
- OMA:   NQGKQVK
- ProtClustDB:   CLSK887001
- BioCyc:   BSUB:BSU10280-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15007; Mature: 15007

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDIEIEKRQHVKDMLD
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHH
IMNQGKQVKTEKTSAPDYEGTIKFHKDRYDSFRLWIDGSQQAVFLKDGTYYKLSKNDTKA
HHHCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCEEEECCCCHHH
LLNIIKKEAKD
HHHHHHHHCCC
>Mature Secondary Structure
MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDIEIEKRQHVKDMLD
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHH
IMNQGKQVKTEKTSAPDYEGTIKFHKDRYDSFRLWIDGSQQAVFLKDGTYYKLSKNDTKA
HHHCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCEEEECCCCHHH
LLNIIKKEAKD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377