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The map label for this gene is yhfF

Identifier: 16078085

GI number: 16078085

Start: 1096116

End: 1096523

Strand: Direct

Name: yhfF

Synonym: BSU10210

Alternate gene names: 16078085

Gene position: 1096116-1096523 (Clockwise)

Preceding gene: 16078084

Following gene: 16078088

Centisome position: 26.0

GC content: 43.38

Gene sequence:

>408_bases
ATGAAGATTTATAAGCTGAAAAGCACATTCGGTTGGGAAGGTGATGACGGGTTGGGAGAACAGCTGATTCAGCAGATCCT
TGCCGGAGAAAAAAGCGCCACGTGCGCGCCGAAATCATTGTATTCAAAAGATGAATTGAGGGACGTTTATCAAACAGCGG
GTCAGCTTGTTACCGTTTATGATAAACATGACAATCCAAGATGCAATATAAAAGTAACAGATGTCTTTGAAACCACCTTT
GGTGCGCCTGATATGAGGTTAGTCAAAGGAGAGGGCAATGGAGACCGAATTGAGGAGTTTCAAGAGGATCATCGGATGGC
ATGGGCGGAACTGATCAAAAGCGGTGAACTGGAGCTGAATGAGGATACTGTTTTGATTACAGAGTTGTTTGTGCTTGTTA
AAGATTAA

Upstream 100 bases:

>100_bases
TTCCCATGCATTTGAACGCACCCATAAATCATCTCTTCGCCATACCGCTAAGCTTCTGTATTACTATGTACAGTCACCAA
TGGTATAAGGGGGAGGACCA

Downstream 100 bases:

>100_bases
AAAAGCCTGCGGGGCAAGAACCCCGCAGGCTTTTCATTAACCAGAAATGGTTGCGTTTTGTTCTGTTTTCGATTGGGACA
TAACAGTTTCTGCTTTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKIYKLKSTFGWEGDDGLGEQLIQQILAGEKSATCAPKSLYSKDELRDVYQTAGQLVTVYDKHDNPRCNIKVTDVFETTF
GAPDMRLVKGEGNGDRIEEFQEDHRMAWAELIKSGELELNEDTVLITELFVLVKD

Sequences:

>Translated_135_residues
MKIYKLKSTFGWEGDDGLGEQLIQQILAGEKSATCAPKSLYSKDELRDVYQTAGQLVTVYDKHDNPRCNIKVTDVFETTF
GAPDMRLVKGEGNGDRIEEFQEDHRMAWAELIKSGELELNEDTVLITELFVLVKD
>Mature_135_residues
MKIYKLKSTFGWEGDDGLGEQLIQQILAGEKSATCAPKSLYSKDELRDVYQTAGQLVTVYDKHDNPRCNIKVTDVFETTF
GAPDMRLVKGEGNGDRIEEFQEDHRMAWAELIKSGELELNEDTVLITELFVLVKD

Specific function: Unknown

COG id: COG4405

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFF_BACSU (O07604)

Other databases:

- EMBL:   Y14083
- EMBL:   AL009126
- PIR:   D69830
- RefSeq:   NP_388902.1
- ProteinModelPortal:   O07604
- SMR:   O07604
- EnsemblBacteria:   EBBACT00000002098
- GeneID:   939309
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10210
- NMPDR:   fig|224308.1.peg.1021
- GenoList:   BSU10210
- GeneTree:   EBGT00050000005799
- HOGENOM:   HBG033271
- OMA:   VFETTFG
- ProtClustDB:   CLSK337065
- BioCyc:   BSUB:BSU10210-MONOMER
- InterPro:   IPR007374
- InterPro:   IPR015947

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 15288; Mature: 15288

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYKLKSTFGWEGDDGLGEQLIQQILAGEKSATCAPKSLYSKDELRDVYQTAGQLVTVY
CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHCCEEEEE
DKHDNPRCNIKVTDVFETTFGAPDMRLVKGEGNGDRIEEFQEDHRMAWAELIKSGELELN
ECCCCCEEEEEEEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEC
EDTVLITELFVLVKD
CCEEEEHHHHHHHCC
>Mature Secondary Structure
MKIYKLKSTFGWEGDDGLGEQLIQQILAGEKSATCAPKSLYSKDELRDVYQTAGQLVTVY
CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHCCEEEEE
DKHDNPRCNIKVTDVFETTFGAPDMRLVKGEGNGDRIEEFQEDHRMAWAELIKSGELELN
ECCCCCEEEEEEEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEC
EDTVLITELFVLVKD
CCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377