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The map label for this gene is yhfA

Identifier: 16078072

GI number: 16078072

Start: 1081413

End: 1082804

Strand: Reverse

Name: yhfA

Synonym: BSU10080

Alternate gene names: 16078072

Gene position: 1082804-1081413 (Counterclockwise)

Preceding gene: 16078073

Following gene: 255767235

Centisome position: 25.69

GC content: 49.28

Gene sequence:

>1392_bases
ATGATGGAAGTCGGGATTTTGCCTGTCCATGTTCTGTATGTGTTTTTTATCGGTGCAATTATCCTATTTATGCTGCTGAG
AAAAGACACGACATTTATTTCTCTATTCGGCATTTTTATCATATCGCTATGGGCCAGCCATTCACTTTCAGCTTCTGTCA
GCAGTTTATTCCACAGCTTTATCTATGCGGCCGGCGAACTGCTGCCCACGATTTTCATCATTTGCTTTATCGTTTCAATG
AGTGATTTGTTAACAAAAACAGGGATAAATGAAGCGATGATTTCTCCCTTTGCAAGCCTTGTGAGAGGGCCTGTGACTGC
CTATTGGCTGATTGGAGGCCTGATGTTCGCCATTTCTCTATTCTTCTGGCCTTCTCCGGGTGTCGCTTTGATCGGCGCCG
TCCTGCTCCCCGCAGCCGCACGTGCCGGTTTGACGCCTCTTGCCGCGGCCATGGCCATGAACTTATTCGGACACGGTTTT
GCCCTGTCAGGAGACTTTGTCATTCAGGCGGCGCCAAAGCTGACTGCGGATGCAGCAGGCATTCCAGTCGGTGATGTCGT
CTCGGCCAGTATTCCGCTTGTGCTGATTATGGGTGTGACAACAACAACTGCTGCCTTTATCATGATTCAGCGCGAACGCA
AAAAACAGGAGCATCCCACTTCTTTTTCCCCCGTTCTTTCCGGCGAACAAGACAACTCGCTGTACTTGCCAAAACGCCTG
CGGTCCATACTGGCTTTTTTGATTCCGCTTGCCTTTCTTGCAGATATCGCCTGCATGCTCTTGTTTAACCTACAAGGAAA
TGATGCAACCGCGTTAATTGGCGGGTCTGCAATTTGTATCCTCTTTACCGTTCATTTTTTCGTGTATAAGCATAAAGGGC
TTGAAAAAATCACCGGCTATTTTATTGACGGATTTAAGTTCGGTTTTAAGGTTTTCGGCCCCGTCATCCCGATTGCCGCT
TTCTTTTATCTTGGCGACTCAGGCTATGAAAGCATACTGGGCACTTCACTCCCTAAAGGTTCCCACGGCATTGTCAACGA
TCTTGGCATTGCTTTATCCCATATGATGCCTATGTCAAAGGAGCTTGCCGCCACTGCATTAACTGCCGCTGGAGCCATAA
CAGGCCTTGACGGCTCAGGATTTTCTGGCATTTCTCTCGCCGGCTCCATCGCAAAGCTCTTTTCGTCCGCTCTCCATGCC
GATCCCGCTATTCTGACCGCGCTCGGACAAATCTCTGCCATCTGGGTGGGCGGAGGAACACTGGTCCCATGGGCTTTGAT
TCCCGCCGCGGCCATTTGCAAAGTTGATCCTTTTGAGCTTGCCAGAAAAAACTTCATTCCCGTCGCGATTGGCCTTTTGG
TGACAACCCTCGCAGCTGTGATGATGCTTTAA

Upstream 100 bases:

>100_bases
AGCTGAAACAGATCAATGTTCATCTTCCATCATAACCCTCCCCTCTGTCCCGGCACCTTCCGCCCGCCTATGAATAATCT
GTAAGCGGAAGGAGTGATCG

Downstream 100 bases:

>100_bases
AACAGCATGAGTTGAAATATTCAGACTTTTTCTATACAATCATGGAAAAGCATAGAAAAGGGGGAAGCGGCTTTGTCCAT
ATCCACACTGCAGAAAGAGA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MMEVGILPVHVLYVFFIGAIILFMLLRKDTTFISLFGIFIISLWASHSLSASVSSLFHSFIYAAGELLPTIFIICFIVSM
SDLLTKTGINEAMISPFASLVRGPVTAYWLIGGLMFAISLFFWPSPGVALIGAVLLPAAARAGLTPLAAAMAMNLFGHGF
ALSGDFVIQAAPKLTADAAGIPVGDVVSASIPLVLIMGVTTTTAAFIMIQRERKKQEHPTSFSPVLSGEQDNSLYLPKRL
RSILAFLIPLAFLADIACMLLFNLQGNDATALIGGSAICILFTVHFFVYKHKGLEKITGYFIDGFKFGFKVFGPVIPIAA
FFYLGDSGYESILGTSLPKGSHGIVNDLGIALSHMMPMSKELAATALTAAGAITGLDGSGFSGISLAGSIAKLFSSALHA
DPAILTALGQISAIWVGGGTLVPWALIPAAAICKVDPFELARKNFIPVAIGLLVTTLAAVMML

Sequences:

>Translated_463_residues
MMEVGILPVHVLYVFFIGAIILFMLLRKDTTFISLFGIFIISLWASHSLSASVSSLFHSFIYAAGELLPTIFIICFIVSM
SDLLTKTGINEAMISPFASLVRGPVTAYWLIGGLMFAISLFFWPSPGVALIGAVLLPAAARAGLTPLAAAMAMNLFGHGF
ALSGDFVIQAAPKLTADAAGIPVGDVVSASIPLVLIMGVTTTTAAFIMIQRERKKQEHPTSFSPVLSGEQDNSLYLPKRL
RSILAFLIPLAFLADIACMLLFNLQGNDATALIGGSAICILFTVHFFVYKHKGLEKITGYFIDGFKFGFKVFGPVIPIAA
FFYLGDSGYESILGTSLPKGSHGIVNDLGIALSHMMPMSKELAATALTAAGAITGLDGSGFSGISLAGSIAKLFSSALHA
DPAILTALGQISAIWVGGGTLVPWALIPAAAICKVDPFELARKNFIPVAIGLLVTTLAAVMML
>Mature_463_residues
MMEVGILPVHVLYVFFIGAIILFMLLRKDTTFISLFGIFIISLWASHSLSASVSSLFHSFIYAAGELLPTIFIICFIVSM
SDLLTKTGINEAMISPFASLVRGPVTAYWLIGGLMFAISLFFWPSPGVALIGAVLLPAAARAGLTPLAAAMAMNLFGHGF
ALSGDFVIQAAPKLTADAAGIPVGDVVSASIPLVLIMGVTTTTAAFIMIQRERKKQEHPTSFSPVLSGEQDNSLYLPKRL
RSILAFLIPLAFLADIACMLLFNLQGNDATALIGGSAICILFTVHFFVYKHKGLEKITGYFIDGFKFGFKVFGPVIPIAA
FFYLGDSGYESILGTSLPKGSHGIVNDLGIALSHMMPMSKELAATALTAAGAITGLDGSGFSGISLAGSIAKLFSSALHA
DPAILTALGQISAIWVGGGTLVPWALIPAAAICKVDPFELARKNFIPVAIGLLVTTLAAVMML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFA_BACSU (O07599)

Other databases:

- EMBL:   Y14083
- EMBL:   AL009126
- PIR:   G69829
- RefSeq:   NP_388889.1
- ProteinModelPortal:   O07599
- EnsemblBacteria:   EBBACT00000001306
- GeneID:   939301
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10080
- NMPDR:   fig|224308.1.peg.1008
- GenoList:   BSU10080
- GeneTree:   EBGT00050000001663
- HOGENOM:   HBG727633
- OMA:   WLAICIP
- ProtClustDB:   CLSK886993
- BioCyc:   BSUB:BSU10080-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48830; Mature: 48830

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xde89d60)-; HASH(0xc51c240)-; HASH(0xd4e9c34)-; HASH(0xe0eba0c)-; HASH(0xcf4c9ec)-; HASH(0xd74ec70)-; HASH(0xdd5079c)-; HASH(0xdf30f8c)-; HASH(0xdc46640)-; HASH(0xc301830)-; HASH(0xd8e37f8)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEVGILPVHVLYVFFIGAIILFMLLRKDTTFISLFGIFIISLWASHSLSASVSSLFHSF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYAAGELLPTIFIICFIVSMSDLLTKTGINEAMISPFASLVRGPVTAYWLIGGLMFAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FFWPSPGVALIGAVLLPAAARAGLTPLAAAMAMNLFGHGFALSGDFVIQAAPKLTADAAG
HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCC
IPVGDVVSASIPLVLIMGVTTTTAAFIMIQRERKKQEHPTSFSPVLSGEQDNSLYLPKRL
CCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHH
RSILAFLIPLAFLADIACMLLFNLQGNDATALIGGSAICILFTVHFFVYKHKGLEKITGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHH
FIDGFKFGFKVFGPVIPIAAFFYLGDSGYESILGTSLPKGSHGIVNDLGIALSHMMPMSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHH
ELAATALTAAGAITGLDGSGFSGISLAGSIAKLFSSALHADPAILTALGQISAIWVGGGT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCC
LVPWALIPAAAICKVDPFELARKNFIPVAIGLLVTTLAAVMML
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MMEVGILPVHVLYVFFIGAIILFMLLRKDTTFISLFGIFIISLWASHSLSASVSSLFHSF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYAAGELLPTIFIICFIVSMSDLLTKTGINEAMISPFASLVRGPVTAYWLIGGLMFAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FFWPSPGVALIGAVLLPAAARAGLTPLAAAMAMNLFGHGFALSGDFVIQAAPKLTADAAG
HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCC
IPVGDVVSASIPLVLIMGVTTTTAAFIMIQRERKKQEHPTSFSPVLSGEQDNSLYLPKRL
CCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHH
RSILAFLIPLAFLADIACMLLFNLQGNDATALIGGSAICILFTVHFFVYKHKGLEKITGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHH
FIDGFKFGFKVFGPVIPIAAFFYLGDSGYESILGTSLPKGSHGIVNDLGIALSHMMPMSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHH
ELAATALTAAGAITGLDGSGFSGISLAGSIAKLFSSALHADPAILTALGQISAIWVGGGT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCC
LVPWALIPAAAICKVDPFELARKNFIPVAIGLLVTTLAAVMML
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377