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The map label for this gene is spoVR

Identifier: 16078005

GI number: 16078005

Start: 1015647

End: 1017053

Strand: Direct

Name: spoVR

Synonym: BSU09400

Alternate gene names: 16078005

Gene position: 1015647-1017053 (Clockwise)

Preceding gene: 16078001

Following gene: 255767222

Centisome position: 24.09

GC content: 43.71

Gene sequence:

>1407_bases
TTGAACGCGGAGGAGAAGAAGGGATTACAGCGGGCAATTGAGGAAATTACCGAAATTGCAAAAGGATTCGGCCTTGATTT
CTACCCGATGAGATATGAAATCTGCCCGGCTGAAATTATTTATACATTTGGCGCGTACGGGATGCCGACAAGATTCAGCC
ACTGGAGCTTCGGCAAGCAGTTTCACAAGATGAAGCTGCACTATGATCTAGGGTTAAGTAAGATCTATGAGCTGGTCATT
AACTCAGATCCATGCTACGCTTTTTTGCTGGACAGCAACTCACTGATCCAAAATAAATTGATTGTCGCACACGTTCTTGC
TCATTGCGATTTCTTCAAAAACAACTGCCGTTTCCAAAACACGAAGCGCGATATGGTGGAAAGCATGGCGGCAACAGCTG
AACGGATAAAACACTATGAACAGGTTCACGGGATAAAAGAAGTCGAATCTTTTTTAGATGCAATCCTTTCGATTCAGGAG
CATATCGATCCGTCGTTGGTCCGACCAAAGCTCCAATGGAGTGTGGATGATGAGGAAGAGGAGATTGAAGAGGCAGCCAC
GCCTTACGATGATCTATGGTCTTTAGATGAAAAGAAACCGAAAAAACAAGTGAAAAAATCGAAAAAACCGTTCCCGCCGC
GGCCTGAAAAAGATATCCTGCTTTTTATCGAGGAGCATTCCCGGGAGCTGGAGCCATGGCAGCGTGATATATTAACGATG
ATGAGAGAGGAAATGCTTTATTTCTGGCCTCAGCTGGAAACCAAGATTATGAATGAGGGCTGGGCTTCCTATTGGCACCA
GAGAATTATACGTGAGCTTGATTTAACCTCTGATGAAGCGATCGAGTTCGCCAAGCTGAATGCAGGTGTCGTTCAGCCGT
CCAAAACAGGCATTAATCCTTATTATTTAGGGCTGAAAATATTTGAAGACATTGAAAAGAGGTACAACAACCCGACGGAG
GAAATGAAGAAAATGGGCGTGCAGCCTGACTCCGGCCGGGAGAAAATGTTTGAGGTCAGGGAGATTGAATCCGATATCTC
TTTCATCCGCAATTATTTAACCAAAGAATTAGTCATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCCGAGATTATA
AAATCATCGATAAACAGTGGAAGTCGGTGCGCGACCAGCTCGTAAGCATGCGGGTAAATGGCGGTTTTCCATATTTGACA
GTAAACGACGGCGATTATATGAAAAATAACGAACTCTATATTAAGCATTGGTATGAGGGCATAGAGTTGGATTTGAAATA
TTTGGAGAAAGTGCTTCCTTATTTATTCCAGCTTTGGGGAAGAAGCGTGCACATTGAGTCTGTGCTTGAGGATAAGGAAG
TCATGTTTTCGTACGACGGAAAAGGTGTTCACCGCAGATATTTATAA

Upstream 100 bases:

>100_bases
ATGAATGTGCCGGGGGAATTTTTTCTTGCCCGAGTGAGACTATCATCTTTTGTCTGGCGGGCTCATACATTATAGATAAG
TCCAAGTAGGGGGGATTCGG

Downstream 100 bases:

>100_bases
AAAAGAGGATGCAGCGTTCTGCATCCTTTTTATTTTCCAGTTTTTAAAATCTTAAATATGATGTTTGCCTGGTCCGTATT
GTTAATCAATCCGCGGAATT

Product: spore cortex synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFHKMKLHYDLGLSKIYELVI
NSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQNTKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQE
HIDPSLVRPKLQWSVDDEEEEIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTM
MREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINPYYLGLKIFEDIEKRYNNPTE
EMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMREDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLT
VNDGDYMKNNELYIKHWYEGIELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL

Sequences:

>Translated_468_residues
MNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFHKMKLHYDLGLSKIYELVI
NSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQNTKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQE
HIDPSLVRPKLQWSVDDEEEEIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTM
MREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINPYYLGLKIFEDIEKRYNNPTE
EMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMREDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLT
VNDGDYMKNNELYIKHWYEGIELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL
>Mature_468_residues
MNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFHKMKLHYDLGLSKIYELVI
NSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQNTKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQE
HIDPSLVRPKLQWSVDDEEEEIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTM
MREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINPYYLGLKIFEDIEKRYNNPTE
EMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMREDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLT
VNDGDYMKNNELYIKHWYEGIELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL

Specific function: Appears to be involved in spore cortex formation

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB

Homologues:

Organism=Escherichia coli, GI1787437, Length=476, Percent_Identity=30.0420168067227, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP5R_BACSU (P37875)

Other databases:

- EMBL:   L26337
- EMBL:   Y14082
- EMBL:   AL009126
- PIR:   D69716
- RefSeq:   NP_388821.1
- ProteinModelPortal:   P37875
- EnsemblBacteria:   EBBACT00000001516
- GeneID:   939747
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09400
- NMPDR:   fig|224308.1.peg.940
- GenoList:   BSU09400
- GeneTree:   EBGT00050000001865
- HOGENOM:   HBG497724
- OMA:   HIDFFQN
- PhylomeDB:   P37875
- ProtClustDB:   CLSK872932
- BioCyc:   BSUB:BSU09400-MONOMER
- InterPro:   IPR007390

Pfam domain/function: PF04293 SpoVR

EC number: NA

Molecular weight: Translated: 55628; Mature: 55628

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHH
FHKMKLHYDLGLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQN
HHHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQEHIDPSLVRPKLQWSVDDEEE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCHH
EIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTM
HHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHH
MREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCH
YYLGLKIFEDIEKRYNNPTEEMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLTVNDGDYMKNNELYIKHWYEG
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCEECCCEEEEEHHCC
IELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHEEEECCCCCCCCCC
>Mature Secondary Structure
MNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHH
FHKMKLHYDLGLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQN
HHHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQEHIDPSLVRPKLQWSVDDEEE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCHH
EIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTM
HHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHH
MREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCH
YYLGLKIFEDIEKRYNNPTEEMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLTVNDGDYMKNNELYIKHWYEG
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCEECCCEEEEEHHCC
IELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377