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The map label for this gene is yhdC

Identifier: 16078001

GI number: 16078001

Start: 1011427

End: 1011750

Strand: Direct

Name: yhdC

Synonym: BSU09360

Alternate gene names: 16078001

Gene position: 1011427-1011750 (Clockwise)

Preceding gene: 16077999

Following gene: 16078005

Centisome position: 23.99

GC content: 43.52

Gene sequence:

>324_bases
ATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAAC
GGACACAGACGAGTCCGTTCAAAAGTGGGAACAGCTTGCCTGGAGCAAAATTCAGGATGAATATAAGGGCGCTTCATTTT
CTGATTATGCTTATATGGGGCGTACAGAGGTGAATGATCAGCAGACTAAAGATGTCTTTCGGGTGACAGTCAGACAGAAA
GATGACACTTTTTCTGTTCGGGCCGAAGTCTATTTTCATCCGGTGACAAATCATATGATCAGCATCAACGTCTTTAGGCT
CTAA

Upstream 100 bases:

>100_bases
TAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCT
GGGTACAGGAGACTGAAAAA

Downstream 100 bases:

>100_bases
TAAAAAACTGTACAGCCGTTAAGGCCGCACAGTTTCTGTTTTTAGAAATATCGTTTTGCACCGAGATAGCGCTGTTTCCA
GTAAGAGTTGTTCATATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKSLPYTIALLFCGLIIVSMAAKGHSTDTDESVQKWEQLAWSKIQDEYKGASFSDYAYMGRTEVNDQQTKDVFRVTVRQK
DDTFSVRAEVYFHPVTNHMISINVFRL

Sequences:

>Translated_107_residues
MKSLPYTIALLFCGLIIVSMAAKGHSTDTDESVQKWEQLAWSKIQDEYKGASFSDYAYMGRTEVNDQQTKDVFRVTVRQK
DDTFSVRAEVYFHPVTNHMISINVFRL
>Mature_107_residues
MKSLPYTIALLFCGLIIVSMAAKGHSTDTDESVQKWEQLAWSKIQDEYKGASFSDYAYMGRTEVNDQQTKDVFRVTVRQK
DDTFSVRAEVYFHPVTNHMISINVFRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDC_BACSU (O07531)

Other databases:

- EMBL:   Y14079
- EMBL:   AL009126
- PIR:   A69825
- RefSeq:   NP_388817.1
- EnsemblBacteria:   EBBACT00000001571
- GeneID:   936252
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09360
- NMPDR:   fig|224308.1.peg.936
- GenoList:   BSU09360
- GeneTree:   EBGT00050000001706
- HOGENOM:   HBG338670
- OMA:   AEVYFHP
- ProtClustDB:   CLSK886952
- BioCyc:   BSUB:BSU09360-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12346; Mature: 12346

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLPYTIALLFCGLIIVSMAAKGHSTDTDESVQKWEQLAWSKIQDEYKGASFSDYAYMG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC
RTEVNDQQTKDVFRVTVRQKDDTFSVRAEVYFHPVTNHMISINVFRL
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MKSLPYTIALLFCGLIIVSMAAKGHSTDTDESVQKWEQLAWSKIQDEYKGASFSDYAYMG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC
RTEVNDQQTKDVFRVTVRQKDDTFSVRAEVYFHPVTNHMISINVFRL
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377