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The map label for this gene is glpP

Identifier: 16077992

GI number: 16077992

Start: 1001744

End: 1002322

Strand: Direct

Name: glpP

Synonym: BSU09270

Alternate gene names: 16077992

Gene position: 1001744-1002322 (Clockwise)

Preceding gene: 255767216

Following gene: 16077993

Centisome position: 23.76

GC content: 43.7

Gene sequence:

>579_bases
ATGATGAGTTTTCACAACCAGCCGATCTTACCGGCTATTCGCAATATGAAGCAATTTGATGAGTTTTTGAACAGTTCATT
CTCTTACGGTGTTATTCTTGATATTCATCTCGGCCAGCTGAAGGGCGTGATCAAAGAAGCGCAAAAGCACGGAAAGAACA
TGATGGTGCACGTCGATCTCATTCAAGGGATTAAGCATGACGAATACGGTGCGGAATTTATATGTCAGGATATCAAGCCC
GCTGGGATTATTTCCACAAGATCGAATGTGATTGCCAAAGCGAAGCAGAAGAAAATTTATGCCATTCAGCGCCTGTTTTT
GCTTGATACAAGCGCGATGGAGAAAAGCATGGAGTTTATCGGCAAGCATAAGCCTGACTTCATCGAAGTGCTTCCCGGCA
TCGTTCCGTCACTCATTCAGGAAATAAAAGAGAAAACAGGGATTCCCATCTTTGCCGGGGGTTTCATCCGTACGGAAGAG
GATGTAGAGCAGGCATTGAAAGCGGGGGCTGTAGCTGTCACAACATCTAATACCAAATTGTGGAAAAAATATGAAAACTT
TTTGACGGAAAGTGATTGA

Upstream 100 bases:

>100_bases
GCCATTTTGCCTGACAGAAGAGGACCTTTCCTTTATCGTGAAAACGGTGAAAGAAAGCTTTCAAACGATATAATATAAAA
GTGAATTATTAAAGGAGCAC

Downstream 100 bases:

>100_bases
CACCGCTTTCATGCACTGATACAATTGCACTAGGTTAATACATTGTGATGGAGAACTCGGAGACCACAGCAGCTCTTTAC
GGCAAATGTTTATGCACCCG

Product: glycerol-3-phosphate responding transcription antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MMSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDLIQGIKHDEYGAEFICQDIKP
AGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFIGKHKPDFIEVLPGIVPSLIQEIKEKTGIPIFAGGFIRTEE
DVEQALKAGAVAVTTSNTKLWKKYENFLTESD

Sequences:

>Translated_192_residues
MMSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDLIQGIKHDEYGAEFICQDIKP
AGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFIGKHKPDFIEVLPGIVPSLIQEIKEKTGIPIFAGGFIRTEE
DVEQALKAGAVAVTTSNTKLWKKYENFLTESD
>Mature_192_residues
MMSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDLIQGIKHDEYGAEFICQDIKP
AGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFIGKHKPDFIEVLPGIVPSLIQEIKEKTGIPIFAGGFIRTEE
DVEQALKAGAVAVTTSNTKLWKKYENFLTESD

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP

Homologues:

Organism=Escherichia coli, GI1789127, Length=185, Percent_Identity=28.1081081081081, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPP_BACSU (P30300)

Other databases:

- EMBL:   M99611
- EMBL:   Y14079
- EMBL:   AL009126
- PIR:   B47700
- RefSeq:   NP_388808.1
- ProteinModelPortal:   P30300
- SMR:   P30300
- EnsemblBacteria:   EBBACT00000003798
- GeneID:   936251
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09270
- NMPDR:   fig|224308.1.peg.927
- GenoList:   BSU09270
- GeneTree:   EBGT00050000001765
- HOGENOM:   HBG470798
- OMA:   AGGLIRT
- PhylomeDB:   P30300
- ProtClustDB:   CLSK2301443
- BioCyc:   BSUB:BSU09270-MONOMER
- GO:   GO:0006350
- InterPro:   IPR006699
- Gene3D:   G3DSA:3.20.20.400

Pfam domain/function: PF04309 G3P_antiterm; SSF110391 G3P_antiterm

EC number: NA

Molecular weight: Translated: 21609; Mature: 21609

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHHH
IQGIKHDEYGAEFICQDIKPAGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFI
HHCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKHKPDFIEVLPGIVPSLIQEIKEKTGIPIFAGGFIRTEEDVEQALKAGAVAVTTSNTKL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECHHHHHHHHHCCEEEEEECCHHH
WKKYENFLTESD
HHHHHHHHCCCC
>Mature Secondary Structure
MMSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHHH
IQGIKHDEYGAEFICQDIKPAGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFI
HHCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKHKPDFIEVLPGIVPSLIQEIKEKTGIPIFAGGFIRTEEDVEQALKAGAVAVTTSNTKL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECHHHHHHHHHCCEEEEEECCHHH
WKKYENFLTESD
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377