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The map label for this gene is ygaE

Identifier: 16077936

GI number: 16077936

Start: 941168

End: 942229

Strand: Reverse

Name: ygaE

Synonym: BSU08700

Alternate gene names: 16077936

Gene position: 942229-941168 (Counterclockwise)

Preceding gene: 255767197

Following gene: 16077930

Centisome position: 22.35

GC content: 40.87

Gene sequence:

>1062_bases
ATGAAACTTGGTGCCCGCATTTTCAAAACCGGGATTGCGATTACACTTGCCCTTTATTTGGCTTCGTGGATCGGGCTTCC
CGCGCCGATTTTCGCTGGAATTGCAGCGATATTTGCGATCCAGCCGTCGATTTACCGCTCTTTTCTCATTATTATTGACC
AGGTTCAAGCAAATATCATCGGAGCTGTGATTGCCACAGTGTTCGGCCTTATTTTCGGACCCAGCCCGATTATGATCGGG
TTAACAGCAGTTATTGTCATTACAATCATGCTGAAACTTAAAATTGAACATACAATTTCAATTGCTCTTGTAACAGTCAT
TGCGATATTAGAATCTGCCGGTGACGACTTTTTAATGTTCGCGCTGATCAGAACAAGCACAGTCATCTTAGGGGTGCTTT
CTTCCTTTATCGTCAACCTTGTGTTTTTGCCTCCTAAGTACGAAACAAAGCTGATTCATAATACCGTCGAAAACACCGAA
GAAATTATGAAGTGGATCAGATTGTCCATGCGGCAGTCGACAGAGCATTCGATTTTGAAAGAGGATATTGAAAAACTGAA
AGAAAAAATGATCAAGCTTGATCAGACATATCTTCTATATAAAGAAGAAAGAAGTTACTTTAAGAAAACGACTTATGTGA
AATCAAGAAAGCTTGTCCTGTTCAGACAGGCCATTATTACTGCAAATCGGGCGCTTGATACATTGAAGAAGCTGCATCGT
CTGGAAAACGAGATCTATCATATGCCGGAAGAGTTTCAGGAAACATTGACTGAAGAACTTGATTACCTGCTTTACTGGCA
CGAGCGGATTTTGATGAGGTTTGTCGGAAAAATCAAGCCGCATGATGACGCGGTTGAAGAAGGCATCCGGTATAAGCAGC
TTTTAACAAAGTCATTTTTAAAAAATCAGCAGAATACGGATGAGGAGCTTATTGATTACAACATGCTCAATATTATGGCA
AGCGCCGTGGAATATCGCGAGCAGCTTGAACATTTAGAAACACTTATCACAAGTTTTCAAACGTATCATCCGAAAGACTG
CGAAATAGAAACAGAAGAGTAA

Upstream 100 bases:

>100_bases
TACTTAATTGTTTAGCAAATAAACTAACCGGGAATTTTAAGGATTAGCCCATTTGCTATGTCACACAATTTACTATAGAA
AGGAATGCACGCACAAACCA

Downstream 100 bases:

>100_bases
CCCGGTTAAACAGCCGGGTTTTTTTATATACAAAAAAATCTTATATCCTTCGTTAAAAGGATATAAGATTGATGTTTTAG
TTCAAATTTTGAATGGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTE
EIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
LENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFLKNQQNTDEELIDYNMLNIMA
SAVEYREQLEHLETLITSFQTYHPKDCEIETEE

Sequences:

>Translated_353_residues
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTE
EIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
LENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFLKNQQNTDEELIDYNMLNIMA
SAVEYREQLEHLETLITSFQTYHPKDCEIETEE
>Mature_353_residues
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTE
EIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
LENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFLKNQQNTDEELIDYNMLNIMA
SAVEYREQLEHLETLITSFQTYHPKDCEIETEE

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAE_BACSU (P71083)

Other databases:

- EMBL:   Z82044
- EMBL:   AL009126
- PIR:   H69815
- RefSeq:   NP_388750.1
- ProteinModelPortal:   P71083
- EnsemblBacteria:   EBBACT00000003409
- GeneID:   939721
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08700
- NMPDR:   fig|224308.1.peg.869
- GenoList:   BSU08700
- GeneTree:   EBGT00050000001356
- HOGENOM:   HBG313992
- OMA:   VQANIIG
- ProtClustDB:   CLSK2518212
- BioCyc:   BSUB:BSU08700-MONOMER
- InterPro:   IPR010343

Pfam domain/function: PF06081 DUF939

EC number: NA

Molecular weight: Translated: 40736; Mature: 40736

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcb89454)-; HASH(0xc8d306c)-; HASH(0xcd224e4)-; HASH(0xdecae60)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANII
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHSILK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KNQQNTDEELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
>Mature Secondary Structure
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANII
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHSILK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KNQQNTDEELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377