Click here to switch to the map view.

The map label for this gene is csbB

Identifier: 16077926

GI number: 16077926

Start: 930818

End: 931807

Strand: Direct

Name: csbB

Synonym: BSU08600

Alternate gene names: 16077926

Gene position: 930818-931807 (Clockwise)

Preceding gene: 16077925

Following gene: 255767195

Centisome position: 22.08

GC content: 40.61

Gene sequence:

>990_bases
ATGAAGCAAGGATTAATCTCGATTATTATCCCGTCTTACAATGAAGGGTATAATGTTAAACTCATTCATGAATCTTTAAA
AAAGGAATTTAAAAACATTCATTATGACTATGAAATATTCTTCATAAACGACGGAAGTGTTGATGACACGCTTCAGCAGA
TCAAAGACTTGGCAGCGACGTGCAGCCGGGTAAAATATATATCTTTTTCTCGAAACTTTGGAAAAGAAGCCGCAATTTTG
GCGGGCTTTGAGCATGTTCAGGGCGAGGCGGTTATTGTCATGGATGCCGATCTGCAGCATCCGACATATTTGCTGAAGGA
ATTTATCAAAGGCTACGAAGAAGGGTATGACCAAGTCATTGCCCAAAGGAACAGAAAAGGGGACAGCTTTGTCCGCTCAC
TCTTATCATCTATGTATTACAAGTTCATTAATAAAGCGGTGGAAGTCGATTTGCGTGACGGTGTCGGTGACTTCAGATTG
TTAAGCCGCCAAGCTGTGAATGCACTTTTGAAGCTGAGCGAAGGAAACCGCTTCTCAAAAGGCCTTTTTTGCTGGATTGG
CTTTGATCAGAAAATTGTATTTTATGAAAATGTCGAACGAAAAAACGGCACCTCCAAATGGTCGTTCAGCAGTCTGTTTA
ACTACGGAATGGACGGCGTCGTTTCATTTAATCATAAGCCGCTGAGATTATGTTTTTATACAGGCATTTTCATCCTGCTG
CTTTCCATCATTTATATCATTGCCACATTCGTTAAAATTCTGACTAACGGTATTTCTGTGCCTGGGTATTTCACCATTAT
CTCAGCAGTGTTATTTCTCGGCGGAGTACAGCTGTTAAGTCTTGGAATAATAGGTGAATATATCGGCCGAATCTATTATG
AAACAAAAAAACGCCCGCATTATTTGATCAAAGAGGCGAATATCCCGAACAAAGACCTGCCTGAAACGAACGAATTAAAA
AGCATGCGGCGTCTGACAAAAATGCACTGA

Upstream 100 bases:

>100_bases
GGTTTAAACGACTTTAAAAAAAGGAATAGCCTTACTGAAGATTTGTGTAAAACTCCCCTAAGGCAATACTTAAAAAGAAT
AATAAAAAGAAGGTGCCTTA

Downstream 100 bases:

>100_bases
AAATACCAAGCGCCATTGGCAGTGCTTTTTTTGCGTGTCTATTATCTTAAAAGCAAGACTGGAGAATTCATATGAAAAGA
AAACATATCATGATCTATGC

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAATCSRVKYISFSRNFGKEAAIL
AGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRL
LSRQAVNALLKLSEGNRFSKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILL
LSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPHYLIKEANIPNKDLPETNELK
SMRRLTKMH

Sequences:

>Translated_329_residues
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAATCSRVKYISFSRNFGKEAAIL
AGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRL
LSRQAVNALLKLSEGNRFSKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILL
LSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPHYLIKEANIPNKDLPETNELK
SMRRLTKMH
>Mature_329_residues
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAATCSRVKYISFSRNFGKEAAIL
AGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRL
LSRQAVNALLKLSEGNRFSKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILL
LSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPHYLIKEANIPNKDLPETNELK
SMRRLTKMH

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily

Homologues:

Organism=Homo sapiens, GI4503363, Length=179, Percent_Identity=29.608938547486, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=38.5382059800665, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=29.4498381877023, Blast_Score=150, Evalue=8e-38,
Organism=Drosophila melanogaster, GI24585265, Length=223, Percent_Identity=29.1479820627803, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSBB_BACSU (Q45539)

Other databases:

- EMBL:   L77099
- EMBL:   D85082
- EMBL:   AL009126
- PIR:   JC5173
- RefSeq:   NP_388740.1
- ProteinModelPortal:   Q45539
- EnsemblBacteria:   EBBACT00000002774
- GeneID:   939717
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08600
- NMPDR:   fig|224308.1.peg.859
- GenoList:   BSU08600
- GeneTree:   EBGT00050000000544
- HOGENOM:   HBG752660
- OMA:   IYYRVHN
- PhylomeDB:   Q45539
- ProtClustDB:   CLSK886912
- BioCyc:   BSUB:BSU08600-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37729; Mature: 37729

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd73c92c)-; HASH(0xb1cfa24)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAAT
CCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHH
CSRVKYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVI
HHHHHHEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRFSK
HHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILL
CEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHH
LSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPH
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YLIKEANIPNKDLPETNELKSMRRLTKMH
EEEEECCCCCCCCCCHHHHHHHHHHHCCH
>Mature Secondary Structure
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAAT
CCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHH
CSRVKYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVI
HHHHHHEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AQRNRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRFSK
HHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFILL
CEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHH
LSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPH
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YLIKEANIPNKDLPETNELKSMRRLTKMH
EEEEECCCCCCCCCCHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377