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The map label for this gene is yfiN

Identifier: 16077900

GI number: 16077900

Start: 907968

End: 909125

Strand: Direct

Name: yfiN

Synonym: BSU08330

Alternate gene names: 16077900

Gene position: 907968-909125 (Clockwise)

Preceding gene: 16077899

Following gene: 16077902

Centisome position: 21.54

GC content: 48.01

Gene sequence:

>1158_bases
GTGAAAAAAATTCTAGCCATTTGCGGCATTGAGCTTTCTCTCATTTTTAAGAAGCCACAGAACTATTTGATCATGTTTGC
TGCCCCGCTTTTGCTTACCTTTGTATTTGGGAGTATGCTCAGCGGCAATGATGATAAGGTGCGGCTTGCAATCGTTGATC
AGGACGATACGATTCTCTCACAGCATTATATTCGGCAGCTGAAGGCACACGATGATATGTATGTATTCGAAAACATGTCT
GAAAGCAAAGCGTCAGAAAAGCTGAAACAAAAGAAAATTGCCGGGATCATCGTCATTTCCCGCTCGTTCCAGACACAGCT
GGAAAAAGGCAAACATCCTGAGCTGATTTTCCGTCACGGCCCTGAGCTGTCGGAAGCGCCGATGGTCAAACAATATGCAG
AAAGCGCATTGGCAACGCTCAATATTCAGGTGACCGCGGCAAAAACGGCATCTCAGACAGCGGGAGAGAACTGGAAGGCG
GCGTATAAAACGGTTTTCGCCAAAAAACATGAAGATATAGTTCCGGCTGTAACACGACAGACGCTCAGTGATAAAAAAGA
GGGTGCGGAAGCAAGTGACACAGCCTCCAGAGCAGCAGGGTTTTCCATCCTGTTTGTCATGCTGACCATGATGGGAGCGG
CTGGAACCATTTTAGAAGCAAGAAAAAACGGCGTATGGTCCAGATTGCTTACAGCCTCTGTCAGCCGAGCCGAAATCGGT
GCTGGGTATGTGCTGTCCTTCTTTGTCATTGGCTGGATTCAATTTGGAATATTGCTTCTTTCCACCCATTGGCTGTTTGG
CATCAACTGGGGGAATCCGGCTGCAGTTATTGTATTAGTGTCACTTTTTCTATTGACCGTTGTCGGCATTGGATTGATGA
TTGCGGCCAACGTCAGAACGCCAGAACAGCAGCTTGCGTTCGGCAACTTGTTTGTCATCGCAACATGTATGGTGAGCGGG
ATGTATTGGCCGATCGACATTGAACCGAAATTTATGCAATCCATCGCTGAATTTCTTCCGCAAAAGTGGGCGATGAGCGG
GTTGACAGAGATTATCGCTAACGGTGCCCGCGTCACAGATATTCTCGGAATCTGCGGCATTTTGCTTGCATTTGCTGCGA
TCACTTTCGCAGCGGGGCTGAAAGCGCTCCGAGCCTAA

Upstream 100 bases:

>100_bases
GCTGACCTTCAAAAGCCTGTGCTTCTTTTTGCGGCGATCGGCTTTTGTTCACTTGTAATTGGTATCAGACGGCTTCATAC
AAGATAAGGAGGTACAAAAG

Downstream 100 bases:

>100_bases
AAAACATCTGCCGTTTAGGCAGATGTTTTTTTGCATGTGGGTACATTCGTATGGGTGCAGCCTGAACTGCGGTTAATCCT
TATCTATCATAGCTAAAATT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLSGNDDKVRLAIVDQDDTILSQHYIRQLKAHDDMYVFENMS
ESKASEKLKQKKIAGIIVISRSFQTQLEKGKHPELIFRHGPELSEAPMVKQYAESALATLNIQVTAAKTASQTAGENWKA
AYKTVFAKKHEDIVPAVTRQTLSDKKEGAEASDTASRAAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRAEIG
AGYVLSFFVIGWIQFGILLLSTHWLFGINWGNPAAVIVLVSLFLLTVVGIGLMIAANVRTPEQQLAFGNLFVIATCMVSG
MYWPIDIEPKFMQSIAEFLPQKWAMSGLTEIIANGARVTDILGICGILLAFAAITFAAGLKALRA

Sequences:

>Translated_385_residues
MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLSGNDDKVRLAIVDQDDTILSQHYIRQLKAHDDMYVFENMS
ESKASEKLKQKKIAGIIVISRSFQTQLEKGKHPELIFRHGPELSEAPMVKQYAESALATLNIQVTAAKTASQTAGENWKA
AYKTVFAKKHEDIVPAVTRQTLSDKKEGAEASDTASRAAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRAEIG
AGYVLSFFVIGWIQFGILLLSTHWLFGINWGNPAAVIVLVSLFLLTVVGIGLMIAANVRTPEQQLAFGNLFVIATCMVSG
MYWPIDIEPKFMQSIAEFLPQKWAMSGLTEIIANGARVTDILGICGILLAFAAITFAAGLKALRA
>Mature_385_residues
MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLSGNDDKVRLAIVDQDDTILSQHYIRQLKAHDDMYVFENMS
ESKASEKLKQKKIAGIIVISRSFQTQLEKGKHPELIFRHGPELSEAPMVKQYAESALATLNIQVTAAKTASQTAGENWKA
AYKTVFAKKHEDIVPAVTRQTLSDKKEGAEASDTASRAAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRAEIG
AGYVLSFFVIGWIQFGILLLSTHWLFGINWGNPAAVIVLVSLFLLTVVGIGLMIAANVRTPEQQLAFGNLFVIATCMVSG
MYWPIDIEPKFMQSIAEFLPQKWAMSGLTEIIANGARVTDILGICGILLAFAAITFAAGLKALRA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFIN_BACSU (P94442)

Other databases:

- EMBL:   D78508
- EMBL:   AL009126
- PIR:   A69804
- RefSeq:   NP_388714.1
- ProteinModelPortal:   P94442
- SMR:   P94442
- EnsemblBacteria:   EBBACT00000000658
- GeneID:   939705
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08330
- NMPDR:   fig|224308.1.peg.833
- GenoList:   BSU08330
- GeneTree:   EBGT00050000000921
- HOGENOM:   HBG343359
- OMA:   MVIANED
- PhylomeDB:   P94442
- ProtClustDB:   CLSK886895
- BioCyc:   BSUB:BSU08330-MONOMER
- InterPro:   IPR000412
- InterPro:   IPR013525

Pfam domain/function: PF01061 ABC2_membrane

EC number: NA

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc8dd534)-; HASH(0xd4d98e4)-; HASH(0xc8a47e8)-; HASH(0xd8877d4)-; HASH(0xd32579c)-; HASH(0xd832190)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLSGNDDKVRLAIVDQDDTILS
CCCHHHHHCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH
QHYIRQLKAHDDMYVFENMSESKASEKLKQKKIAGIIVISRSFQTQLEKGKHPELIFRHG
HHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHEEEEEECHHHHHHHCCCCCCEEEECC
PELSEAPMVKQYAESALATLNIQVTAAKTASQTAGENWKAAYKTVFAKKHEDIVPAVTRQ
CCCCCCHHHHHHHHHHHHEEEEEEEECHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
TLSDKKEGAEASDTASRAAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRAEIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCC
AGYVLSFFVIGWIQFGILLLSTHWLFGINWGNPAAVIVLVSLFLLTVVGIGLMIAANVRT
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
PEQQLAFGNLFVIATCMVSGMYWPIDIEPKFMQSIAEFLPQKWAMSGLTEIIANGARVTD
CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILGICGILLAFAAITFAAGLKALRA
HHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLSGNDDKVRLAIVDQDDTILS
CCCHHHHHCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH
QHYIRQLKAHDDMYVFENMSESKASEKLKQKKIAGIIVISRSFQTQLEKGKHPELIFRHG
HHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHEEEEEECHHHHHHHCCCCCCEEEECC
PELSEAPMVKQYAESALATLNIQVTAAKTASQTAGENWKAAYKTVFAKKHEDIVPAVTRQ
CCCCCCHHHHHHHHHHHHEEEEEEEECHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
TLSDKKEGAEASDTASRAAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRAEIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCC
AGYVLSFFVIGWIQFGILLLSTHWLFGINWGNPAAVIVLVSLFLLTVVGIGLMIAANVRT
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
PEQQLAFGNLFVIATCMVSGMYWPIDIEPKFMQSIAEFLPQKWAMSGLTEIIANGARVTD
CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILGICGILLAFAAITFAAGLKALRA
HHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377