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The map label for this gene is yfiI

Identifier: 16077895

GI number: 16077895

Start: 902506

End: 903687

Strand: Direct

Name: yfiI

Synonym: BSU08280

Alternate gene names: 16077895

Gene position: 902506-903687 (Clockwise)

Preceding gene: 16077894

Following gene: 16077896

Centisome position: 21.41

GC content: 48.9

Gene sequence:

>1182_bases
ATGATGCTAAATGGAGAAAGAATCATCTCTAAGCCGCTTCGCTGGGCAATGGTAGGCGGCGGGCGGCTCAGCCAGGTTGG
ATATAAACATCGTATTGGAGCGCTGAGAGACAATACTGCTTTTCAATTAACTGCTGGCGCTTTTGATATCGATGCCGAAA
GAGGAAAAGATTTCGGGGTGAACCTTGGAGTGGATGCGGAACGCTGTTATCCCAACTATCAAACCATGTTTGCCGAGGAA
GCGAAAAGACAGGATGGCATAGAGGTAGTATCGATTGCCACTCCGAACGGCACTCATTATGAGATTTGTAAGGCGGCGCT
TGAAGCAGGAGTGCATGTCATCTGTGAAAAACCGCTGTTCTTCACTTCAGCAGAGGGGCAGGAAATCAAAGCGCTCGCAG
AGAAAAAAGGGAAAATTGTCGGCGTGACGTACGGTTTTTCAGGCAATCAAATGCTTCTTCAAATGCGTGCGATGATTGAA
CAAGGAATGATCGGCGATATTCGCGTGGTTGACTTGCAGTACACACACGGTTTTTGTGCAACAGATGAAGGTGAAAAGAT
AAGCGCTGCACAGAAATGGCGTGTCGACCCTGCGATCGCCGGGCCAAGCTTTGTGCTGGGCGATTTATCTACCCACACGT
ATTATATGTCACAGCTTATTATGCCAAAGATGAAAATTAAGGAGCTGCTGTGTGACCGACAGAGCTTCGTCGGCAGCCGC
GCACCGCTAGAGGATAATGCCCATGTGCTGATGCATTATGAAAATGGAGCGGTCGGAACGATGTGGACATCGTCAATCAA
TGCCGGATGTATGGATGGCCATAGAATCCGGATTGTCGGCTCAAAGGCAAGCATTGAGTGGTGGGACAGCAAGCCAAATG
AACTGACGTATGAAGTGCAGGGAGAGCCGGGCCAGACACTCGTTCGCGGCATGCCGTATTTAGATGATGTTTGCAACGCC
GATGAACGACTGGGCGCCTTACACAGCGAAGGGCTGTCCGAAGCATGGGCCAATATTTATCTTAAATTTGCCATTGCGAT
AGACGCCAAAAACCGTGAAGATGAAGAAATCTTGAACAACTTGGTTTATCCTGACATTGATGCAGGGATCGAGGGCATTC
GCTGGATTGAGAACTGCGTGCGCTCGGCAAACCAAGGGTCAGTTTGGGTTGAATTTAAATAA

Upstream 100 bases:

>100_bases
GGTTTCTTTAGAAATGGAGGATCTGACGATGTCACCTGAAGCGGGCATCCGTACTTCTGTAGAAGCTTTAAAACAAACCA
TCAGCCAATAGGAGGTTTTC

Downstream 100 bases:

>100_bases
ATGAGGGAATGCGCCGCATATGACATAAAGTTCATATGCGGTTTTTATTTTCCAGAAACTCCTGTCAAAAATGCCCTGAG
GCAGGTATGATAAGAAGGGA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MMLNGERIISKPLRWAMVGGGRLSQVGYKHRIGALRDNTAFQLTAGAFDIDAERGKDFGVNLGVDAERCYPNYQTMFAEE
AKRQDGIEVVSIATPNGTHYEICKAALEAGVHVICEKPLFFTSAEGQEIKALAEKKGKIVGVTYGFSGNQMLLQMRAMIE
QGMIGDIRVVDLQYTHGFCATDEGEKISAAQKWRVDPAIAGPSFVLGDLSTHTYYMSQLIMPKMKIKELLCDRQSFVGSR
APLEDNAHVLMHYENGAVGTMWTSSINAGCMDGHRIRIVGSKASIEWWDSKPNELTYEVQGEPGQTLVRGMPYLDDVCNA
DERLGALHSEGLSEAWANIYLKFAIAIDAKNREDEEILNNLVYPDIDAGIEGIRWIENCVRSANQGSVWVEFK

Sequences:

>Translated_393_residues
MMLNGERIISKPLRWAMVGGGRLSQVGYKHRIGALRDNTAFQLTAGAFDIDAERGKDFGVNLGVDAERCYPNYQTMFAEE
AKRQDGIEVVSIATPNGTHYEICKAALEAGVHVICEKPLFFTSAEGQEIKALAEKKGKIVGVTYGFSGNQMLLQMRAMIE
QGMIGDIRVVDLQYTHGFCATDEGEKISAAQKWRVDPAIAGPSFVLGDLSTHTYYMSQLIMPKMKIKELLCDRQSFVGSR
APLEDNAHVLMHYENGAVGTMWTSSINAGCMDGHRIRIVGSKASIEWWDSKPNELTYEVQGEPGQTLVRGMPYLDDVCNA
DERLGALHSEGLSEAWANIYLKFAIAIDAKNREDEEILNNLVYPDIDAGIEGIRWIENCVRSANQGSVWVEFK
>Mature_393_residues
MMLNGERIISKPLRWAMVGGGRLSQVGYKHRIGALRDNTAFQLTAGAFDIDAERGKDFGVNLGVDAERCYPNYQTMFAEE
AKRQDGIEVVSIATPNGTHYEICKAALEAGVHVICEKPLFFTSAEGQEIKALAEKKGKIVGVTYGFSGNQMLLQMRAMIE
QGMIGDIRVVDLQYTHGFCATDEGEKISAAQKWRVDPAIAGPSFVLGDLSTHTYYMSQLIMPKMKIKELLCDRQSFVGSR
APLEDNAHVLMHYENGAVGTMWTSSINAGCMDGHRIRIVGSKASIEWWDSKPNELTYEVQGEPGQTLVRGMPYLDDVCNA
DERLGALHSEGLSEAWANIYLKFAIAIDAKNREDEEILNNLVYPDIDAGIEGIRWIENCVRSANQGSVWVEFK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family

Homologues:

Organism=Escherichia coli, GI87081947, Length=81, Percent_Identity=34.5679012345679, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFII_BACSU (P94437)

Other databases:

- EMBL:   D78508
- EMBL:   AL009126
- PIR:   D69803
- RefSeq:   NP_388709.1
- ProteinModelPortal:   P94437
- SMR:   P94437
- EnsemblBacteria:   EBBACT00000003693
- GeneID:   936177
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08280
- NMPDR:   fig|224308.1.peg.828
- GenoList:   BSU08280
- GeneTree:   EBGT00070000033932
- HOGENOM:   HBG666152
- OMA:   CEKPLFF
- ProtClustDB:   CLSK886890
- BioCyc:   BSUB:BSU08280-MONOMER
- GO:   GO:0005488
- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43585; Mature: 43585

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLNGERIISKPLRWAMVGGGRLSQVGYKHRIGALRDNTAFQLTAGAFDIDAERGKDFGV
CCCCCHHHHHCCCEEEEECCCCHHHCCHHHHCCCCCCCCEEEEECCCEEEECCCCCCCCE
NLGVDAERCYPNYQTMFAEEAKRQDGIEVVSIATPNGTHYEICKAALEAGVHVICEKPLF
ECCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCEE
FTSAEGQEIKALAEKKGKIVGVTYGFSGNQMLLQMRAMIEQGMIGDIRVVDLQYTHGFCA
EECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEE
TDEGEKISAAQKWRVDPAIAGPSFVLGDLSTHTYYMSQLIMPKMKIKELLCDRQSFVGSR
CCCCCEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
APLEDNAHVLMHYENGAVGTMWTSSINAGCMDGHRIRIVGSKASIEWWDSKPNELTYEVQ
CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEE
GEPGQTLVRGMPYLDDVCNADERLGALHSEGLSEAWANIYLKFAIAIDAKNREDEEILNN
CCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHH
LVYPDIDAGIEGIRWIENCVRSANQGSVWVEFK
CCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MMLNGERIISKPLRWAMVGGGRLSQVGYKHRIGALRDNTAFQLTAGAFDIDAERGKDFGV
CCCCCHHHHHCCCEEEEECCCCHHHCCHHHHCCCCCCCCEEEEECCCEEEECCCCCCCCE
NLGVDAERCYPNYQTMFAEEAKRQDGIEVVSIATPNGTHYEICKAALEAGVHVICEKPLF
ECCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCEE
FTSAEGQEIKALAEKKGKIVGVTYGFSGNQMLLQMRAMIEQGMIGDIRVVDLQYTHGFCA
EECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEE
TDEGEKISAAQKWRVDPAIAGPSFVLGDLSTHTYYMSQLIMPKMKIKELLCDRQSFVGSR
CCCCCEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
APLEDNAHVLMHYENGAVGTMWTSSINAGCMDGHRIRIVGSKASIEWWDSKPNELTYEVQ
CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEE
GEPGQTLVRGMPYLDDVCNADERLGALHSEGLSEAWANIYLKFAIAIDAKNREDEEILNN
CCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHH
LVYPDIDAGIEGIRWIENCVRSANQGSVWVEFK
CCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377