Click here to switch to the map view.

The map label for this gene is sspH

Identifier: 16077878

GI number: 16077878

Start: 885629

End: 885808

Strand: Direct

Name: sspH

Synonym: BSU08110

Alternate gene names: 16077878

Gene position: 885629-885808 (Clockwise)

Preceding gene: 16077877

Following gene: 16077885

Centisome position: 21.01

GC content: 39.44

Gene sequence:

>180_bases
ATGAATATTCAAAGGGCGAAAGAAATTGTAGAATCTCCCGACATGAAGAAAGTAACATATAACGGCGTTCCTATTTACAT
TCAGCACGTAAATGAAGAAACTGGAACAGCAAGAATTTATCCGCTTGACGAACCGCAAGAGGAGCATGAAGTGCAGCTGA
ACAGCTTAAAAGAGGATTAA

Upstream 100 bases:

>100_bases
CTTTCTACAAACGCCTGAAAAAATTCAACTTGTCCGCTGAATCATAAAGCATACTTCCTTCAGGAAATGGAAACGTTATG
TATTGAAGGAGGGTGTTACG

Downstream 100 bases:

>100_bases
ACAAAAATGGCCCGCTTCATAAGCAGGCCATTTTGTTATCCGCGCGGCGCAAATAAAATAACACAGACACCGATGAGACA
AATGAATGCGCCGATCCAGT

Product: acid-soluble spore protein H

Products: NA

Alternate protein names: SASP H

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARIYPLDEPQEEHEVQLNSLKED

Sequences:

>Translated_59_residues
MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARIYPLDEPQEEHEVQLNSLKED
>Mature_59_residues
MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARIYPLDEPQEEHEVQLNSLKED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore core

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sspH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSPH_BACSU (O31552)

Other databases:

- EMBL:   AL009126
- PIR:   D69807
- RefSeq:   NP_388692.1
- EnsemblBacteria:   EBBACT00000003867
- GeneID:   939208
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08110
- NMPDR:   fig|224308.1.peg.811
- GenoList:   BSU08110
- GeneTree:   EBGT00050000002889
- HOGENOM:   HBG304500
- OMA:   PIYIQHV
- ProtClustDB:   PRK03174
- BioCyc:   BSUB:BSU08110-MONOMER
- HAMAP:   MF_00667
- InterPro:   IPR012610
- ProDom:   PD052450
- TIGRFAMs:   TIGR02861

Pfam domain/function: PF08141 SspH

EC number: NA

Molecular weight: Translated: 6869; Mature: 6869

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARIYPLDEPQEEHEVQLNSLKED
CCHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCHHHECCCCCCC
>Mature Secondary Structure
MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARIYPLDEPQEEHEVQLNSLKED
CCHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCHHHECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9852018; 10333516